RNA–Protein interactions for RNA: ENST00000553674.1

UBR7-202, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 2

Gene UBR7, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-202ENST00000553674 CBLN2Q8IUK8 224 aa12.96□□□□□ -0.33
UBR7-202ENST00000553674 C14orf178Q8N769 122 aaPredicted RBP12.96□□□□□ -0.33
UBR7-202ENST00000553674 OR4C5Q8NGB2 326 aa12.96□□□□□ -0.33
UBR7-202ENST00000553674 DNAH7Q8WXX0 4024 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 FHL2Q14192 279 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 TMEM88Q6PEY1 159 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 KCNIP4Q6PIL6 250 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 Q6ZSN1 163 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 BORCS7Q96B45 105 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 BTF3L4Q96K17 158 aa12.95□□□□□ -0.34
UBR7-202ENST00000553674 TRAV9-1A0A075B6T8 112 aa12.94□□□□□ -0.34
UBR7-202ENST00000553674 IGHV3-73A0A0B4J1V6 119 aa12.94□□□□□ -0.34
UBR7-202ENST00000553674 SCO1O75880 301 aa12.94□□□□□ -0.34
UBR7-202ENST00000553674 ATP5G1P05496 136 aa12.94□□□□□ -0.34
UBR7-202ENST00000553674 ELOBQ15370 118 aa12.94□□□□□ -0.34
UBR7-202ENST00000553674 NACAE9PAV3 2078 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 S100PP25815 95 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 CAMPP49913 170 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 ZFP2Q6ZN57 461 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 ATP5L2Q7Z4Y8 100 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 GATD1Q8NB37 220 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 AP1S3Q96PC3 154 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 SMCO4Q9NRQ5 59 aa12.93□□□□□ -0.34
UBR7-202ENST00000553674 TGIF2-C20orf24A0A0A6YYL0 155 aa12.92□□□□□ -0.34
UBR7-202ENST00000553674 A0A1B0GW15 77 aa12.92□□□□□ -0.34
UBR7-202ENST00000553674 TRGC1P0CF51 173 aa12.92□□□□□ -0.34
UBR7-202ENST00000553674 HBBP68871 147 aa12.92□□□□□ -0.34
UBR7-202ENST00000553674 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
UBR7-202ENST00000553674 HTN3P15516 51 aa12.91□□□□□ -0.34
UBR7-202ENST00000553674 FAM74A4Q5TZK3 123 aa12.91□□□□□ -0.34
UBR7-202ENST00000553674 RNF185Q96GF1 192 aa12.91□□□□□ -0.34
UBR7-202ENST00000553674 DYNC2H1Q8NCM8 4307 aaKnown RBP12.91□□□□□ -0.34
UBR7-202ENST00000553674 TRBV24-1A0A075B6N3 115 aa12.9□□□□□ -0.34
UBR7-202ENST00000553674 F5H768 121 aa12.9□□□□□ -0.34
UBR7-202ENST00000553674 CIDEAO60543 219 aa12.9□□□□□ -0.34
UBR7-202ENST00000553674 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
UBR7-202ENST00000553674 DPH3P1Q9H4G8 78 aa12.9□□□□□ -0.34
UBR7-202ENST00000553674 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
UBR7-202ENST00000553674 TRAV10A0A0B4J240 114 aa12.89□□□□□ -0.35
UBR7-202ENST00000553674 RHODO00212 210 aa12.89□□□□□ -0.35
UBR7-202ENST00000553674 PHLDA1Q8WV24 401 aaPredicted RBP12.89□□□□□ -0.35
UBR7-202ENST00000553674 Q9UF83 564 aa12.89□□□□□ -0.35
UBR7-202ENST00000553674 TRGV4A0A0C4DH28 118 aa12.88□□□□□ -0.35
UBR7-202ENST00000553674 RAB4AP20338 218 aa12.88□□□□□ -0.35
UBR7-202ENST00000553674 TMEM136Q6ZRR5 245 aa12.88□□□□□ -0.35
UBR7-202ENST00000553674 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
UBR7-202ENST00000553674 VSIG2Q96IQ7 327 aa12.88□□□□□ -0.35
UBR7-202ENST00000553674 HHLA3Q9XRX5 114 aa12.88□□□□□ -0.35
UBR7-202ENST00000553674 S100A8P05109 93 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 MGPP08493 103 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 SMIM17P0DL12 118 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 CRYBA4P53673 196 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 RAB4BP61018 213 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 FAM104BQ5XKR9 115 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 RASL11AQ6T310 242 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
UBR7-202ENST00000553674 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
UBR7-202ENST00000553674 SUMO4Q6EEV6 95 aa12.86□□□□□ -0.35
UBR7-202ENST00000553674 SMIM15Q7Z3B0 74 aa12.86□□□□□ -0.35
UBR7-202ENST00000553674 WWC2-AS2Q96NR7 200 aa12.86□□□□□ -0.35
UBR7-202ENST00000553674 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
UBR7-202ENST00000553674 TRAV26-1A0A087WT03 109 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 TRBV6-4A0A1B0GX49 114 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 COLCA2A8K830 154 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 P0DMU3 169 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 FAM231AP0DMU4 169 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 FAM231CP0DMU5 169 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 ZNF56Q15929 161 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 FAM210BQ96KR6 192 aa12.85□□□□□ -0.35
UBR7-202ENST00000553674 TRAV26-2A0A0B4J265 109 aa12.84□□□□□ -0.35
UBR7-202ENST00000553674 A0A0J9YY99 117 aa12.84□□□□□ -0.35
UBR7-202ENST00000553674 LOC100131303A0A0U1RQF7 123 aa12.84□□□□□ -0.35
UBR7-202ENST00000553674 F5H697 171 aa12.84□□□□□ -0.35
UBR7-202ENST00000553674 M0QY20 66 aa12.84□□□□□ -0.35
UBR7-202ENST00000553674 MRPL51Q4U2R6 128 aaKnown RBP12.84□□□□□ -0.35
UBR7-202ENST00000553674 CEMP1Q6PRD7 247 aaPredicted RBP12.84□□□□□ -0.35
UBR7-202ENST00000553674 CSMD3Q7Z407 3707 aa12.84□□□□□ -0.35
UBR7-202ENST00000553674 SLAQ13239 276 aa12.83□□□□□ -0.36
UBR7-202ENST00000553674 GNB1LQ9BYB4 327 aa12.83□□□□□ -0.36
UBR7-202ENST00000553674 SMKR1H3BMG3 65 aa12.82□□□□□ -0.36
UBR7-202ENST00000553674 PAX4O43316 350 aa12.82□□□□□ -0.36
UBR7-202ENST00000553674 MUC7Q8TAX7 377 aa12.82□□□□□ -0.36
UBR7-202ENST00000553674 STARD9Q9P2P6 4700 aa12.82□□□□□ -0.36
UBR7-202ENST00000553674 K7EQD1 137 aa12.81□□□□□ -0.36
UBR7-202ENST00000553674 H3BNG1 76 aa12.8□□□□□ -0.36
UBR7-202ENST00000553674 RHOHQ15669 191 aa12.8□□□□□ -0.36
UBR7-202ENST00000553674 COX19Q49B96 90 aa12.8□□□□□ -0.36
UBR7-202ENST00000553674 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
UBR7-202ENST00000553674 FRZBQ92765 325 aa12.8□□□□□ -0.36
UBR7-202ENST00000553674 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
UBR7-202ENST00000553674 NCR2O95944 276 aa12.79□□□□□ -0.36
UBR7-202ENST00000553674 LINC00694P0DN24 101 aa12.79□□□□□ -0.36
UBR7-202ENST00000553674 GYPEP15421 78 aa12.79□□□□□ -0.36
UBR7-202ENST00000553674 RPS10P46783 165 aaKnown RBP12.79□□□□□ -0.36
UBR7-202ENST00000553674 NEXN-AS1Q8NBZ9 246 aa12.79□□□□□ -0.36
UBR7-202ENST00000553674 RPL39LQ96EH5 51 aaKnown RBP12.79□□□□□ -0.36
UBR7-202ENST00000553674 PLECQ15149 4684 aaKnown RBP12.79□□□□□ -0.36
UBR7-202ENST00000553674 TRBV10-1A0A0K0K1A3 114 aa12.78□□□□□ -0.36
UBR7-202ENST00000553674 IGLL5B9A064 214 aa12.78□□□□□ -0.36
UBR7-202ENST00000553674 HLA-DQA1P01909 254 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms