RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DEFB135Q30KP9 77 aa11.64□□□□□ -0.55
ACTN1-209ENST00000553659 TDRG1Q3Y452 100 aa11.64□□□□□ -0.55
ACTN1-209ENST00000553659 ANXA2RQ3ZCQ2 193 aa11.64□□□□□ -0.55
ACTN1-209ENST00000553659 PRSS3P2Q8NHM4 247 aa11.64□□□□□ -0.55
ACTN1-209ENST00000553659 SCRT2Q9NQ03 307 aa11.64□□□□□ -0.55
ACTN1-209ENST00000553659 AP5S1Q9NUS5 200 aa11.64□□□□□ -0.55
ACTN1-209ENST00000553659 KIR2DL5BA0A0G2JN68 375 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 KIR2DL5BA0A0G2JPC4 375 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 H3BVH4 76 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 J3KRW8 73 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 KIR2DL5AQ8N109 375 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 KIR2DL5BQ8NHK3 375 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 RNF183Q96D59 192 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 HSPB8Q9UJY1 196 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 PHLDA3Q9Y5J5 127 aa11.63□□□□□ -0.55
ACTN1-209ENST00000553659 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 DEFB1P60022 68 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 KRTDAPP60985 99 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 OR10AG1Q8NH19 301 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 MRAP2Q96G30 205 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 RNF185Q96GF1 192 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 URB1-AS1Q96HZ7 61 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 CLUHP3Q96NS8 147 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 MAP1LC3AQ9H492 121 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
ACTN1-209ENST00000553659 NXPH4O95158 308 aa11.61□□□□□ -0.55
ACTN1-209ENST00000553659 LEPROTL1O95214 131 aa11.61□□□□□ -0.55
ACTN1-209ENST00000553659 PPP1R17O96001 155 aa11.61□□□□□ -0.55
ACTN1-209ENST00000553659 FAM19A2Q8N3H0 131 aa11.61□□□□□ -0.55
ACTN1-209ENST00000553659 AP1S3Q96PC3 154 aa11.61□□□□□ -0.55
ACTN1-209ENST00000553659 TRGV11A0A075B6L2 103 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 IGHV1-24A0A0C4DH33 117 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 MUC21A0A0G2JKD1 596 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 MUC21A0A140T8X8 626 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 C20orf202A1L168 122 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 BTF3P20290 206 aaKnown RBP11.6□□□□□ -0.55
ACTN1-209ENST00000553659 DEFB131AP59861 70 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 PMCHL1Q16048 86 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 ODF3L2Q3SX64 289 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 MUC21Q5SSG8 566 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 TEX43Q6ZNM6 134 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 DPH3P1Q9H4G8 78 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 MAP6D1Q9H9H5 199 aa11.6□□□□□ -0.55
ACTN1-209ENST00000553659 NXT2Q9NPJ8 142 aaKnown RBP11.6□□□□□ -0.55
ACTN1-209ENST00000553659 C3orf79P0CE67 100 aa11.59□□□□□ -0.55
ACTN1-209ENST00000553659 RPL35AP18077 110 aaKnown RBP11.59□□□□□ -0.55
ACTN1-209ENST00000553659 SSTP61278 116 aa11.59□□□□□ -0.55
ACTN1-209ENST00000553659 SYT8Q8NBV8 401 aa11.59□□□□□ -0.55
ACTN1-209ENST00000553659 PHLDA1Q8WV24 401 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-209ENST00000553659 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
ACTN1-209ENST00000553659 IGHV1OR15-1A0A075B7D0 117 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 PRSS47A8MTI9 375 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 H3BMM0 161 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 M0R381 172 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 LGALS9CQ6DKI2 356 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 CDPF1Q6NVV7 123 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 AMTNQ6UX39 209 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 TMEM70Q9BUB7 260 aa11.58□□□□□ -0.56
ACTN1-209ENST00000553659 TRAV12-3A0A0B4J271 114 aa11.57□□□□□ -0.56
ACTN1-209ENST00000553659 LINC01546A6NGU7 62 aa11.57□□□□□ -0.56
ACTN1-209ENST00000553659 TNFRSF6BO95407 300 aa11.57□□□□□ -0.56
ACTN1-209ENST00000553659 NPYP01303 97 aa11.57□□□□□ -0.56
ACTN1-209ENST00000553659 RNASE3P12724 160 aaKnown RBP11.57□□□□□ -0.56
ACTN1-209ENST00000553659 MAP1LC3CQ9BXW4 147 aa11.57□□□□□ -0.56
ACTN1-209ENST00000553659 CRXO43186 299 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-209ENST00000553659 SMIM17P0DL12 118 aa11.56□□□□□ -0.56
ACTN1-209ENST00000553659 EVI2AP22794 236 aa11.56□□□□□ -0.56
ACTN1-209ENST00000553659 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-209ENST00000553659 PET117Q6UWS5 81 aa11.56□□□□□ -0.56
ACTN1-209ENST00000553659 Q6ZQT7 251 aa11.56□□□□□ -0.56
ACTN1-209ENST00000553659 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
ACTN1-209ENST00000553659 TIMM8BQ9Y5J9 83 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-209ENST00000553659 FRAS1Q86XX4 4008 aa11.56□□□□□ -0.56
ACTN1-209ENST00000553659 K7EMI3 77 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 GNRH2O43555 120 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 HBDP02042 147 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 SPINK13Q1W4C9 94 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 POM121L12Q8N7R1 296 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 Q8N8P6 123 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 C9orf85Q96MD7 179 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 LINC00467Q9BRT7 94 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 CSTL1Q9H114 145 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 KMT2AQ03164 3969 aa11.55□□□□□ -0.56
ACTN1-209ENST00000553659 IGHV3-16A0A0C4DH30 117 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 NCR2O95944 276 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 IGKV3-20P01619 116 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 KIR3DS1Q14943 382 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 C20orf78Q9BR46 151 aa11.54□□□□□ -0.56
ACTN1-209ENST00000553659 LOC389332A0A1B0GUA5 103 aa11.53□□□□□ -0.56
ACTN1-209ENST00000553659 SMKR1H3BMG3 65 aa11.53□□□□□ -0.56
ACTN1-209ENST00000553659 PIK3CD-AS1Q5SR53 167 aa11.53□□□□□ -0.56
ACTN1-209ENST00000553659 Q8N976 141 aa11.53□□□□□ -0.56
ACTN1-209ENST00000553659 TRAV12-2A0A075B6T6 113 aa11.52□□□□□ -0.57
ACTN1-209ENST00000553659 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
ACTN1-209ENST00000553659 INSP01308 110 aa11.52□□□□□ -0.57
ACTN1-209ENST00000553659 ZNF124Q15973 351 aa11.52□□□□□ -0.57
ACTN1-209ENST00000553659 SPATA12Q7Z6I5 190 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms