RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 MTURNQ8N3F0 131 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 NUP35Q8NFH5 326 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 FAM210BQ96KR6 192 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 PGLYRP4Q96LB8 373 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 GNB1LQ9BYB4 327 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 NAGKQ9UJ70 344 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 TP53TG3Q9ULZ0 132 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 PHLDA3Q9Y5J5 127 aa3.65□□□□□ -1.83
VTI1B-202ENST00000553619 IGHV3OR16-12A0A075B7B8 117 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 GRIFINA4D1Z8 144 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 COLCA2A8K830 154 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 SNURFLB1AK76 121 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 G3V4G9 280 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 SNAI2O43623 268 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 HLA-DQA1P01909 254 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 PPBPP02775 128 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 TYMSP04818 313 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 ARMS2P0C7Q2 107 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 IGLC6P0CF74 106 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 SMIM17P0DL12 118 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 IGHV4-30-4P0DP06 118 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 NTF3P20783 257 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 RPS10P46783 165 aaKnown RBP3.64□□□□□ -1.83
VTI1B-202ENST00000553619 TCL1AP56279 114 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 HBBP68871 147 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 TWIST1Q15672 202 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 DEFB121Q5J5C9 76 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 PIK3CD-AS1Q5SR53 167 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 PRR9Q5T870 116 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 ZFP82Q8N141 532 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 FRZBQ92765 325 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 PTH2Q96A98 100 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 C16orf74Q96GX8 76 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 NDUFAF3Q9BU61 184 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 TPPP3Q9BW30 176 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 TRAPPC1Q9Y5R8 145 aa3.64□□□□□ -1.83
VTI1B-202ENST00000553619 NOTCH3Q9UM47 2321 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 IGHV4-4A0A075B6R2 117 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 TGIF2-C20orf24A0A0A6YYL0 155 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 IGHV3-16A0A0C4DH30 117 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 RBMY1BA6NDE4 496 aaKnown RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 RBMY1EA6NEQ0 496 aaKnown RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 M0R143 59 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 M0R2P5 195 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 SPRY2O43597 315 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 SPINK4O60575 86 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 RBMY1DP0C7P1 496 aaKnown RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 GZMBP10144 247 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 RAB5AP20339 215 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 KPRPQ5T749 579 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 MRPL54Q6P161 138 aaKnown RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 PET117Q6UWS5 81 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 ZNF705AQ6ZN79 300 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 C1orf158Q8N1D5 194 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 CSNK1G2-AS1Q8NCQ2 148 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 TMEM263Q8WUH6 116 aaKnown RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 GTSF1Q8WW33 167 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 RCHY1Q96PM5 261 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 CNFNQ9BYD5 112 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 TMEM191AQ9H0A3 160 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 WFDC10AQ9H1F0 79 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 TP53TG1Q9Y2A0 90 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 TIMM8BQ9Y5J9 83 aaPredicted RBP3.63□□□□□ -1.83
VTI1B-202ENST00000553619 ATRQ13535 2644 aa3.63□□□□□ -1.83
VTI1B-202ENST00000553619 TEX48A0A1B0GUV7 120 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 A8MWV9 139 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 H3BVH4 76 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 K7EP13 123 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 PPP1R17O96001 155 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 APCSP02743 223 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 RNASE3P12724 160 aaKnown RBP3.62□□□□□ -1.83
VTI1B-202ENST00000553619 MIFP14174 115 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 CTRLP40313 264 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 CAMPP49913 170 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 SNRPEP62304 92 aaKnown RBP3.62□□□□□ -1.83
VTI1B-202ENST00000553619 FABP9Q0Z7S8 132 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 LGALS9BQ3B8N2 356 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 RNF183Q96D59 192 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 C9orf85Q96MD7 179 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 YPEL4Q96NS1 127 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 SCRT2Q9NQ03 307 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 MDFICQ9P1T7 246 aa3.62□□□□□ -1.83
VTI1B-202ENST00000553619 CUBNO60494 3623 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 NF1P21359 2839 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 A0A1B0GXF2 115 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 LYRM9A8MSI8 78 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 TMEM238C9JI98 176 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 M0R381 172 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 GIG44P09565 113 aaPredicted RBP3.61□□□□□ -1.83
VTI1B-202ENST00000553619 FRMD6-AS1P0C7T7 363 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 SCGB1A1P11684 91 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 ZNF25P17030 456 aaPredicted RBP3.61□□□□□ -1.83
VTI1B-202ENST00000553619 AZU1P20160 251 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 DAZ2Q13117 558 aaKnown RBP3.61□□□□□ -1.83
VTI1B-202ENST00000553619 ZNF876PQ49A33 203 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 FAM104BQ5XKR9 115 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 Q6ZQT7 251 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 TMEM136Q6ZRR5 245 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 GATD1Q8NB37 220 aa3.61□□□□□ -1.83
VTI1B-202ENST00000553619 OR11H2Q8NH07 326 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms