RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 FLI1Q01543 452 aaPredicted RBP3.29□□□□□ -1.88
ATXN3-222ENST00000553570 PRR9Q5T870 116 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 ZNF493Q6ZR52 646 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 C5orf17Q8NAS9 161 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
ATXN3-222ENST00000553570 C20orf144Q9BQM9 153 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 PYGO2Q9BRQ0 406 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 NDUFAF3Q9BU61 184 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 GNG13Q9P2W3 67 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 KLF12Q9Y4X4 402 aa3.29□□□□□ -1.88
ATXN3-222ENST00000553570 TMSB15BA0A087X1C1 80 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 TRAV21A0A0B4J279 112 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 LCE6AA0A183 80 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 A0A1W2PRE2 83 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 FAM74A7A6NL05 159 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 KLLNB2CW77 178 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 C9JCJ5 164 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 M0R2N4 97 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 PEX7O00628 323 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 ZNF324O75467 553 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-222ENST00000553570 GCGP01275 180 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 NMBP08949 121 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 CRISP2P16562 243 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 S100A4P26447 101 aaKnown RBP3.28□□□□□ -1.88
ATXN3-222ENST00000553570 AKR1C3P42330 323 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 CEBPGP53567 150 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 CCL20P78556 96 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 SMUG1Q53HV7 270 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 SAPCD1Q5SSQ6 148 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 DPPA3Q6W0C5 159 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 Q6ZTI0 123 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 SLC51BQ86UW2 128 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 ZFAND2AQ8N6M9 145 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 CYB561D1Q8N8Q1 229 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 PCNPQ8WW12 178 aaKnown RBP3.28□□□□□ -1.88
ATXN3-222ENST00000553570 MBD3L1Q8WWY6 194 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 TVP23CQ96ET8 276 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 ODF3Q96PU9 254 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-222ENST00000553570 GFRA4Q9GZZ7 299 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 MRPL16Q9NX20 251 aaKnown RBP3.28□□□□□ -1.88
ATXN3-222ENST00000553570 APLNQ9ULZ1 77 aa3.28□□□□□ -1.88
ATXN3-222ENST00000553570 TRGV4A0A0C4DH28 118 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 SERTM2A0A1B0GWG4 89 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 GRIFINA4D1Z8 144 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 GGTLC3B5MD39 225 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 M0R036 132 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 IFNA1P01562 189 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
ATXN3-222ENST00000553570 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-222ENST00000553570 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
ATXN3-222ENST00000553570 NDUFA5Q16718 116 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 ALKAL2Q6UX46 152 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 ZNF680Q8NEM1 530 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 SUN5Q8TC36 379 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 KCNS1Q96KK3 526 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 FAM19A4Q96LR4 140 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 MED9Q9NWA0 146 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 LENEPQ9Y5L5 61 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
ATXN3-222ENST00000553570 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 IGLV4-3A0A075B6K6 122 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 A0A096LPF7 62 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 RAB19A4D1S5 217 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 FBLL1A6NHQ2 334 aaKnown RBP3.26□□□□□ -1.89
ATXN3-222ENST00000553570 B4DEV8 164 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 TYMSP04818 313 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 P0DMU3 169 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 FAM231AP0DMU4 169 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 FAM231CP0DMU5 169 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 SULT1A2P50226 295 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 TCTAP57738 103 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 Q6AWC8 147 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 C9orf62Q8N4C0 152 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 ARL6IP6Q8N6S5 226 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 FMC1Q96HJ9 113 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 EIF5A2Q9GZV4 153 aaKnown RBP3.26□□□□□ -1.89
ATXN3-222ENST00000553570 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
ATXN3-222ENST00000553570 MUC21A0A0G2JKD1 596 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 TRBV7-9A0A0J9YWB2 115 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 M0R2P5 195 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 SPINK4O60575 86 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 SH2D1AO60880 128 aa3.25□□□□□ -1.89
ATXN3-222ENST00000553570 S100A9P06702 114 aaKnown RBP3.25□□□□□ -1.89
ATXN3-222ENST00000553570 PFN1P07737 140 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms