RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TIRAPP58753 221 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 WFDC2Q14508 124 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 LINC01556Q5JQF7 62 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 LELP1Q5T871 98 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 OR10AG1Q8NH19 301 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 GNG13Q9P2W3 67 aa12.2□□□□□ -0.46
SHMT2-206ENST00000553529 TPT1P13693 172 aaKnown RBP12.19□□□□□ -0.46
SHMT2-206ENST00000553529 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
SHMT2-206ENST00000553529 SFRP2Q96HF1 295 aa12.19□□□□□ -0.46
SHMT2-206ENST00000553529 MLST8Q9BVC4 326 aa12.19□□□□□ -0.46
SHMT2-206ENST00000553529 TRAV9-2A0A087WT02 112 aa12.18□□□□□ -0.46
SHMT2-206ENST00000553529 BAGE2Q86Y30 109 aa12.18□□□□□ -0.46
SHMT2-206ENST00000553529 TCTE3Q8IZS6 198 aa12.18□□□□□ -0.46
SHMT2-206ENST00000553529 PHLDA3Q9Y5J5 127 aa12.18□□□□□ -0.46
SHMT2-206ENST00000553529 TRAV8-6A0A0B4J262 113 aa12.17□□□□□ -0.46
SHMT2-206ENST00000553529 LRCOL1A6NCL2 159 aa12.17□□□□□ -0.46
SHMT2-206ENST00000553529 IBA57-AS1B1ANH7 110 aa12.17□□□□□ -0.46
SHMT2-206ENST00000553529 GZMBP10144 247 aa12.17□□□□□ -0.46
SHMT2-206ENST00000553529 SH2D6Q7Z4S9 175 aa12.17□□□□□ -0.46
SHMT2-206ENST00000553529 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
SHMT2-206ENST00000553529 NFE4Q86UQ8 179 aa12.17□□□□□ -0.46
SHMT2-206ENST00000553529 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
SHMT2-206ENST00000553529 RAB19A4D1S5 217 aa12.16□□□□□ -0.46
SHMT2-206ENST00000553529 RPL35P42766 123 aaKnown RBP12.16□□□□□ -0.46
SHMT2-206ENST00000553529 SYT8Q8NBV8 401 aa12.16□□□□□ -0.46
SHMT2-206ENST00000553529 CIDEAO60543 219 aa12.15□□□□□ -0.46
SHMT2-206ENST00000553529 IGLV2-8P01709 118 aa12.15□□□□□ -0.46
SHMT2-206ENST00000553529 XGP55808 180 aa12.15□□□□□ -0.46
SHMT2-206ENST00000553529 TCEAL7Q9BRU2 100 aa12.15□□□□□ -0.46
SHMT2-206ENST00000553529 LECT2O14960 151 aa12.14□□□□□ -0.47
SHMT2-206ENST00000553529 C1QBP02746 253 aa12.14□□□□□ -0.47
SHMT2-206ENST00000553529 PIK3CD-AS1Q5SR53 167 aa12.14□□□□□ -0.47
SHMT2-206ENST00000553529 ZFP82Q8N141 532 aa12.14□□□□□ -0.47
SHMT2-206ENST00000553529 RBFOX3A6NFN3 312 aa12.13□□□□□ -0.47
SHMT2-206ENST00000553529 CENPWQ5EE01 88 aa12.13□□□□□ -0.47
SHMT2-206ENST00000553529 Q8N1X5 172 aa12.13□□□□□ -0.47
SHMT2-206ENST00000553529 C10orf126Q8N4M7 172 aa12.13□□□□□ -0.47
SHMT2-206ENST00000553529 FAT1Q14517 4588 aa12.13□□□□□ -0.47
SHMT2-206ENST00000553529 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
SHMT2-206ENST00000553529 PSCAO43653 123 aa12.12□□□□□ -0.47
SHMT2-206ENST00000553529 SULT1A2P50226 295 aa12.12□□□□□ -0.47
SHMT2-206ENST00000553529 C11orf52Q96A22 123 aa12.12□□□□□ -0.47
SHMT2-206ENST00000553529 RHODO00212 210 aa12.11□□□□□ -0.47
SHMT2-206ENST00000553529 EREGO14944 169 aa12.11□□□□□ -0.47
SHMT2-206ENST00000553529 SNAI2O43623 268 aa12.11□□□□□ -0.47
SHMT2-206ENST00000553529 PGPEP1Q9NXJ5 209 aa12.11□□□□□ -0.47
SHMT2-206ENST00000553529 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
SHMT2-206ENST00000553529 EIF5AP63241 154 aaKnown RBP12.1□□□□□ -0.47
SHMT2-206ENST00000553529 ZNF56Q15929 161 aa12.1□□□□□ -0.47
SHMT2-206ENST00000553529 C9orf62Q8N4C0 152 aa12.1□□□□□ -0.47
SHMT2-206ENST00000553529 NEXN-AS1Q8NBZ9 246 aa12.1□□□□□ -0.47
SHMT2-206ENST00000553529 MANBALQ9NQG1 85 aa12.1□□□□□ -0.47
SHMT2-206ENST00000553529 K7EP13 123 aa12.09□□□□□ -0.47
SHMT2-206ENST00000553529 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
SHMT2-206ENST00000553529 UBE2D3P61077 147 aa12.09□□□□□ -0.47
SHMT2-206ENST00000553529 UBE2D2P62837 147 aa12.09□□□□□ -0.47
SHMT2-206ENST00000553529 Q8N814 137 aa12.09□□□□□ -0.47
SHMT2-206ENST00000553529 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-206ENST00000553529 NIT1Q86X76 327 aa12.08□□□□□ -0.48
SHMT2-206ENST00000553529 TPPP3Q9BW30 176 aa12.08□□□□□ -0.48
SHMT2-206ENST00000553529 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
SHMT2-206ENST00000553529 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
SHMT2-206ENST00000553529 IGLV5-52A0A0A0MRZ9 124 aa12.07□□□□□ -0.48
SHMT2-206ENST00000553529 SMR3BP02814 79 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-206ENST00000553529 LINC01620Q4KN68 170 aa12.07□□□□□ -0.48
SHMT2-206ENST00000553529 DEFB104AQ8WTQ1 72 aa12.07□□□□□ -0.48
SHMT2-206ENST00000553529 FAM30AQ9NZY2 134 aa12.07□□□□□ -0.48
SHMT2-206ENST00000553529 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
SHMT2-206ENST00000553529 C19orf71A6NCJ1 209 aa12.06□□□□□ -0.48
SHMT2-206ENST00000553529 OR5AL1P0C617 328 aa12.06□□□□□ -0.48
SHMT2-206ENST00000553529 GCSHP23434 173 aa12.06□□□□□ -0.48
SHMT2-206ENST00000553529 NKX2-5P52952 324 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-206ENST00000553529 MEF2BQ02080 365 aaPredicted RBP12.06□□□□□ -0.48
SHMT2-206ENST00000553529 SPANXN1Q5VSR9 72 aa12.06□□□□□ -0.48
SHMT2-206ENST00000553529 CDPF1Q6NVV7 123 aa12.06□□□□□ -0.48
SHMT2-206ENST00000553529 BAALCQ8WXS3 180 aa12.06□□□□□ -0.48
SHMT2-206ENST00000553529 CXCL1P09341 107 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 IGLC6P0CF74 106 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 BCL2P10415 239 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 RAB5CP51148 216 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 OR2D3Q8NGH3 330 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 MED9Q9NWA0 146 aa12.05□□□□□ -0.48
SHMT2-206ENST00000553529 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.04□□□□□ -0.48
SHMT2-206ENST00000553529 TRBV7-3A0A075B6L6 115 aa12.04□□□□□ -0.48
SHMT2-206ENST00000553529 F5H697 171 aa12.04□□□□□ -0.48
SHMT2-206ENST00000553529 RAB4BP61018 213 aa12.04□□□□□ -0.48
SHMT2-206ENST00000553529 RPL36AP83881 106 aaKnown RBP12.04□□□□□ -0.48
SHMT2-206ENST00000553529 NTM-AS1Q6ZSK4 140 aa12.04□□□□□ -0.48
SHMT2-206ENST00000553529 RPL36ALQ969Q0 106 aaKnown RBP12.04□□□□□ -0.48
SHMT2-206ENST00000553529 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
SHMT2-206ENST00000553529 GNG4P50150 75 aa12.03□□□□□ -0.48
SHMT2-206ENST00000553529 LAGE3Q14657 143 aa12.03□□□□□ -0.48
SHMT2-206ENST00000553529 OR10G8Q8NGN5 311 aa12.03□□□□□ -0.48
SHMT2-206ENST00000553529 A0A087WWC5 75 aa12.02□□□□□ -0.49
SHMT2-206ENST00000553529 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
SHMT2-206ENST00000553529 K7EN84 100 aa12.02□□□□□ -0.49
SHMT2-206ENST00000553529 MGPP08493 103 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms