RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 TRBV7-3A0A075B6L6 115 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 C11orf86A6NJI1 115 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 Q6ZQT7 251 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 LINC00173Q6ZV60 143 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 COX7B2Q8TF08 81 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 PRAC2D3DTV9 90 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 MUSTN1Q8IVN3 82 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 PIFOQ8TCI5 191 aa8.89□□□□□ -0.99
SYNE2-208ENST00000553289 MYCNOSP40205 109 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 CXCL5P42830 114 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 PCNX1Q96RV3 2341 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 A4D1N5 150 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 SHANK1Q9Y566 2161 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 C4orf3Q8WVX3 66 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 BAALCQ8WXS3 180 aa8.88□□□□□ -0.99
SYNE2-208ENST00000553289 UBE2BP63146 152 aa8.87□□□□□ -0.99
SYNE2-208ENST00000553289 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
SYNE2-208ENST00000553289 FUSP35637 526 aaKnown RBP eCLIP8.87□□□□□ -0.99
SYNE2-208ENST00000553289 ZFP36P26651 326 aaKnown RBP8.87□□□□□ -0.99
SYNE2-208ENST00000553289 MED13Q9UHV7 2174 aa8.87□□□□□ -0.99
SYNE2-208ENST00000553289 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 A0A1W2PNU3 283 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-208ENST00000553289 SPRY2O43597 315 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-208ENST00000553289 ZGRF1Q86YA3 2104 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 FSTL3O95633 263 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 Q71RC1 249 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-208ENST00000553289 FANCD2OSQ96PS1 177 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 MRPL36Q9P0J6 103 aaKnown RBP8.86□□□□□ -0.99
SYNE2-208ENST00000553289 COL4A3Q01955 1670 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 HIST2H2BCQ6DN03 193 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 TEN1Q86WV5 123 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 PCNX2A6NKB5 2137 aa8.86□□□□□ -0.99
SYNE2-208ENST00000553289 E7EUB6 86 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 LINC01620Q4KN68 170 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 NOTCH3Q9UM47 2321 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 hADV29S1A0JD25 119 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 A6NDX4 124 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 CGB7P0DN87 165 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 CCL18P55774 89 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 TRBV10-1A0A0K0K1A3 114 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 VSIG2Q96IQ7 327 aa8.85□□□□□ -0.99
SYNE2-208ENST00000553289 IGKV1D-37A0A075B6S9 117 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 ODF1Q14990 250 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 ODF3Q96PU9 254 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 A0A0B4J2C4 111 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 A0A0J9YX75 114 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 MSMPQ1L6U9 139 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 TNRC6AQ8NDV7 1962 aaKnown RBP8.84□□□□□ -0.99
SYNE2-208ENST00000553289 FXYD2P54710 66 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
SYNE2-208ENST00000553289 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 ODF3BA8MYP8 253 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 TDRG1Q3Y452 100 aa8.84□□□□□ -0.99
SYNE2-208ENST00000553289 NDUFA1O15239 70 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 TMEM258P61165 79 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 HHLA3Q9XRX5 114 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 KIF26AQ9ULI4 1882 aaPredicted RBP8.83□□□□□ -1
SYNE2-208ENST00000553289 JMJD7-PLA2G4BH0Y9G9 81 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 INSL3P51460 131 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 C20orf203Q8NBC4 194 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 H3BT86 120 aa8.83□□□□□ -1
SYNE2-208ENST00000553289 IGHV1-58A0A0C4DH39 117 aa8.82□□□□□ -1
SYNE2-208ENST00000553289 TNFRSF13BO14836 293 aaPredicted RBP8.82□□□□□ -1
SYNE2-208ENST00000553289 TMEM263Q8WUH6 116 aaKnown RBP8.82□□□□□ -1
SYNE2-208ENST00000553289 Q9HAA7 133 aa8.82□□□□□ -1
SYNE2-208ENST00000553289 RPL18AQ02543 176 aaKnown RBP8.82□□□□□ -1
SYNE2-208ENST00000553289 TAX1BP3O14907 124 aa8.82□□□□□ -1
SYNE2-208ENST00000553289 ZNF106Q9H2Y7 1883 aaKnown RBP8.81□□□□□ -1
SYNE2-208ENST00000553289 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
SYNE2-208ENST00000553289 ATOX1O00244 68 aa8.81□□□□□ -1
SYNE2-208ENST00000553289 Q8NA96 180 aa8.81□□□□□ -1
SYNE2-208ENST00000553289 CLPSL1A2RUU4 121 aa8.81□□□□□ -1
SYNE2-208ENST00000553289 TIRAPP58753 221 aa8.8□□□□□ -1
SYNE2-208ENST00000553289 LTBP2Q14767 1821 aa8.8□□□□□ -1
SYNE2-208ENST00000553289 LOXL1Q08397 574 aaPredicted RBP8.8□□□□□ -1
SYNE2-208ENST00000553289 DEFB105AQ8NG35 78 aa8.8□□□□□ -1
SYNE2-208ENST00000553289 MDFICQ9P1T7 246 aa8.8□□□□□ -1
SYNE2-208ENST00000553289 UNQ9165/PRO28630Q6UXU0 137 aa8.8□□□□□ -1
SYNE2-208ENST00000553289 IGLV10-54A0A075B6I4 117 aa8.8□□□□□ -1
SYNE2-208ENST00000553289 DENND4AQ7Z401 1863 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGLV2-8P01709 118 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 CCDC140Q96MF4 163 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 TM2D2Q9BX73 214 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 LGALS9O00182 355 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGHV3-30P01768 117 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGHV3-33P01772 117 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGF1P05019 195 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGHV3-30-3P0DP02 117 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGHV3-30-5P0DP03 117 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 PROP1O75360 226 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 TMEM61Q8N0U2 210 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 LRRC75A-AS1Q8N1F1 130 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 PRO0255Q9UI72 69 aa8.79□□□□□ -1
SYNE2-208ENST00000553289 IGLC6P0CF74 106 aa8.78□□□□□ -1
SYNE2-208ENST00000553289 BRWD1-AS2P59051 145 aa8.78□□□□□ -1
SYNE2-208ENST00000553289 RBM3P98179 157 aaKnown RBP8.78□□□□□ -1
SYNE2-208ENST00000553289 EIF4EBP1Q13541 118 aaPredicted RBP8.78□□□□□ -1
SYNE2-208ENST00000553289 MLST8Q9BVC4 326 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms