RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 C1orf54Q8WWF1 131 aa1.1□□□□□ -2.23
SCFD1-209ENST00000553280 SPTSSAQ969W0 71 aa1.1□□□□□ -2.23
SCFD1-209ENST00000553280 A0A096LNT2 108 aa1.09□□□□□ -2.23
SCFD1-209ENST00000553280 EFCAB10A6NFE3 127 aa1.09□□□□□ -2.23
SCFD1-209ENST00000553280 GNG7O60262 68 aa1.09□□□□□ -2.23
SCFD1-209ENST00000553280 CCL3L1P16619 93 aa1.09□□□□□ -2.23
SCFD1-209ENST00000553280 ELOF1P60002 83 aaKnown RBP1.09□□□□□ -2.23
SCFD1-209ENST00000553280 DSCR8Q96T75 97 aa1.09□□□□□ -2.23
SCFD1-209ENST00000553280 KIF13AQ9H1H9 1805 aa1.08□□□□□ -2.24
SCFD1-209ENST00000553280 FAM92AA1XBS5 289 aa1.08□□□□□ -2.24
SCFD1-209ENST00000553280 RPL7L1Q6DKI1 246 aaKnown RBP1.08□□□□□ -2.24
SCFD1-209ENST00000553280 IBTKQ9P2D0 1353 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-209ENST00000553280 AKAP11Q9UKA4 1901 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 LAMB1P07942 1786 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 FAM25AB3EWG3 89 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 FAM25CB3EWG5 89 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 FAM25GB3EWG6 89 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 NDUFB6O95139 128 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 PDCD10Q9BUL8 212 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 C10orf95Q9H7T3 257 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 RPRMQ9NS64 109 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 MYH6P13533 1939 aa1.07□□□□□ -2.24
SCFD1-209ENST00000553280 ABCA4P78363 2273 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 KNTC1P50748 2209 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 A0A087WTM6 91 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 RBAKDNA6NC62 111 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 SNCGO76070 127 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 UBE2G1P62253 170 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 SSBP1Q04837 148 aaKnown RBP1.06□□□□□ -2.24
SCFD1-209ENST00000553280 C20orf197Q8N268 126 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 C10orf82Q8WW14 230 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 COPS9Q8WXC6 57 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 SNRNP25Q9BV90 132 aaKnown RBP1.06□□□□□ -2.24
SCFD1-209ENST00000553280 ESPL1Q14674 2120 aa1.06□□□□□ -2.24
SCFD1-209ENST00000553280 A6NIN4 97 aa1.05□□□□□ -2.24
SCFD1-209ENST00000553280 IFNA17P01571 189 aa1.05□□□□□ -2.24
SCFD1-209ENST00000553280 PHLPP1O60346 1717 aa1.05□□□□□ -2.24
SCFD1-209ENST00000553280 MUC22E2RYF6 1773 aaPredicted RBP1.04□□□□□ -2.24
SCFD1-209ENST00000553280 ZNF462Q96JM2 2506 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 MCRIP1C9JLW8 97 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 APODP05090 189 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 CBLN1P23435 193 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 COX7B2Q8TF08 81 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 CFTRP13569 1480 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 ZNF518AQ6AHZ1 1483 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 MBD5Q9P267 1494 aa1.04□□□□□ -2.24
SCFD1-209ENST00000553280 RPL13AP3Q6NVV1 102 aa1.03□□□□□ -2.24
SCFD1-209ENST00000553280 SPATA8Q6RVD6 105 aa1.03□□□□□ -2.24
SCFD1-209ENST00000553280 C4orf33Q8N1A6 199 aa1.03□□□□□ -2.24
SCFD1-209ENST00000553280 SEC11CQ9BY50 192 aa1.03□□□□□ -2.24
SCFD1-209ENST00000553280 BCL9LQ86UU0 1499 aa1.03□□□□□ -2.24
SCFD1-209ENST00000553280 HIST1H1DP16402 221 aaKnown RBP1.02□□□□□ -2.25
SCFD1-209ENST00000553280 UBE2D1P51668 147 aa1.02□□□□□ -2.25
SCFD1-209ENST00000553280 FAM74A4Q5TZK3 123 aa1.02□□□□□ -2.25
SCFD1-209ENST00000553280 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
SCFD1-209ENST00000553280 FAM103A1Q9BTL3 118 aaKnown RBP1.02□□□□□ -2.25
SCFD1-209ENST00000553280 AGPAT4-IT1Q9H0P7 198 aa1.02□□□□□ -2.25
SCFD1-209ENST00000553280 NOTCH1P46531 2555 aa1.02□□□□□ -2.25
SCFD1-209ENST00000553280 RERGLQ9H628 205 aa1.01□□□□□ -2.25
SCFD1-209ENST00000553280 FBN2P35556 2912 aa1□□□□□ -2.25
SCFD1-209ENST00000553280 BTG2P78543 158 aa1□□□□□ -2.25
SCFD1-209ENST00000553280 MEIG1Q5JSS6 88 aa1□□□□□ -2.25
SCFD1-209ENST00000553280 S100A7L2Q5SY68 101 aa1□□□□□ -2.25
SCFD1-209ENST00000553280 ZNF436-AS1Q8NC38 126 aaPredicted RBP1□□□□□ -2.25
SCFD1-209ENST00000553280 SPTSSBQ8NFR3 76 aa1□□□□□ -2.25
SCFD1-209ENST00000553280 SERP1Q9Y6X1 66 aa1□□□□□ -2.25
SCFD1-209ENST00000553280 MAP2P11137 1827 aaKnown RBP1□□□□□ -2.25
SCFD1-209ENST00000553280 KIAA0100Q14667 2235 aaKnown RBP1□□□□□ -2.25
SCFD1-209ENST00000553280 IFT140Q96RY7 1462 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 NAIPQ13075 1403 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 ROCK2O75116 1388 aaKnown RBP0.99□□□□□ -2.25
SCFD1-209ENST00000553280 LOC285556D6RIA3 1793 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 NRXN2Q9P2S2 1712 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 TRBV10-3A0A0K0K1G6 114 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 Q6AWC8 147 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 V9GYV3 84 aa0.99□□□□□ -2.25
SCFD1-209ENST00000553280 TRBV7-1A0A0A6YYK4 115 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 CLPSL1A2RUU4 121 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 F2Z2F3 143 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 FGF7P21781 194 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 ZNF818PQ6ZRF7 136 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 LSM10Q969L4 123 aaKnown RBP0.98□□□□□ -2.25
SCFD1-209ENST00000553280 NAA60Q9H7X0 242 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 PLXNA1Q9UIW2 1896 aa0.98□□□□□ -2.25
SCFD1-209ENST00000553280 ASH1LQ9NR48 2969 aaKnown RBP0.97□□□□□ -2.25
SCFD1-209ENST00000553280 CCL8P80075 99 aa0.97□□□□□ -2.25
SCFD1-209ENST00000553280 C12orf73Q69YU5 71 aa0.97□□□□□ -2.25
SCFD1-209ENST00000553280 BPESC1Q9GZL8 116 aa0.97□□□□□ -2.25
SCFD1-209ENST00000553280 CDK13Q14004 1512 aaKnown RBP0.97□□□□□ -2.25
SCFD1-209ENST00000553280 KDM6BO15054 1643 aa0.97□□□□□ -2.25
SCFD1-209ENST00000553280 FOCADQ5VW36 1801 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 SPEF2Q9C093 1822 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 ABCA1O95477 2261 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 LOC100130705A0A1B0GUX0 176 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 EDDM3BP56851 147 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 SPINK7P58062 85 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 Q96NJ1 140 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 PHIPQ8WWQ0 1821 aa0.96□□□□□ -2.26
SCFD1-209ENST00000553280 TANC1Q9C0D5 1861 aa0.95□□□□□ -2.26
SCFD1-209ENST00000553280 A0A1B0GV90 55 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms