RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 TRAV8-4A0A0B4J246 113 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 FAM24AA6NFZ4 105 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 K7EPK0 472 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 AGPAT2O15120 278 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 NDUFB4O95168 129 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 P01737 135 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 CAV2P51636 162 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 AP3S2P59780 193 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 SLC38A11Q08AI6 406 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 PDE6HQ13956 83 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 HIGD2BQ4VC39 106 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 ZNF506Q5JVG8 444 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 C15orf56Q8N910 161 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 S100A16Q96FQ6 103 aaKnown RBP3.56□□□□□ -1.84
LINC02406-201ENST00000553029 KCNS1Q96KK3 526 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 CIB3Q96Q77 187 aaPredicted RBP3.56□□□□□ -1.84
LINC02406-201ENST00000553029 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 ALKBH7Q9BT30 221 aaPredicted RBP3.56□□□□□ -1.84
LINC02406-201ENST00000553029 RPP21Q9H633 154 aaKnown RBP3.56□□□□□ -1.84
LINC02406-201ENST00000553029 VCX3AQ9NNX9 186 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 SCN3BQ9NY72 215 aa3.56□□□□□ -1.84
LINC02406-201ENST00000553029 A8MWV9 139 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 GOSR2O14653 212 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 AMTP48728 403 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 RAB2AP61019 212 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 RBX1P62877 108 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 REG3AQ06141 175 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 RNASE10Q5GAN6 216 aaKnown RBP3.55□□□□□ -1.84
LINC02406-201ENST00000553029 SPANXN5Q5MJ07 72 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 C10orf113Q5VZT2 155 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 LINC00337Q8N6G1 96 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 ASB13Q8WXK3 278 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 C14orf166Q9Y224 244 aaKnown RBP3.55□□□□□ -1.84
LINC02406-201ENST00000553029 TIMM9Q9Y5J7 89 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 NEBP20929 6669 aa3.55□□□□□ -1.84
LINC02406-201ENST00000553029 TRAV21A0A0B4J279 112 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 A0A0B4J2A0 478 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 A0A1W2PNN7 141 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 H3BP45 60 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 EIF3GO75821 320 aaKnown RBP eCLIP3.54□□□□□ -1.84
LINC02406-201ENST00000553029 PTTG1O95997 202 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 TBPP20226 339 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 MXD1Q05195 221 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.54□□□□□ -1.84
LINC02406-201ENST00000553029 TERB2Q8NHR7 220 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 PTH2Q96A98 100 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 SOSTQ9BQB4 213 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 GEMIN7Q9H840 131 aaKnown RBP3.54□□□□□ -1.84
LINC02406-201ENST00000553029 TXNL4BQ9NX01 149 aaKnown RBP3.54□□□□□ -1.84
LINC02406-201ENST00000553029 SHPKQ9UHJ6 478 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
LINC02406-201ENST00000553029 A0A087WZ39 114 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 TMEM238C9JI98 176 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 MED6O75586 246 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 SDC2P34741 201 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 RAB5CP51148 216 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 UBE2D3P61077 147 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 UBE2D2P62837 147 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 RPL36AP83881 106 aaKnown RBP3.53□□□□□ -1.84
LINC02406-201ENST00000553029 UBE2NLQ5JXB2 153 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 UFSP1Q6NVU6 142 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 Q6ZNX1 250 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 PHF5AQ7RTV0 110 aaKnown RBP3.53□□□□□ -1.84
LINC02406-201ENST00000553029 SMIM15Q7Z3B0 74 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 LYZL2Q7Z4W2 148 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 OCC1Q8TAD7 63 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 RPL36ALQ969Q0 106 aaKnown RBP3.53□□□□□ -1.84
LINC02406-201ENST00000553029 SEC22CQ9BRL7 303 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 NPVFQ9HCQ7 196 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 COMMD3Q9UBI1 195 aa3.53□□□□□ -1.84
LINC02406-201ENST00000553029 GVQW2A0A096LPI5 108 aaPredicted RBP3.52□□□□□ -1.85
LINC02406-201ENST00000553029 TRBV10-1A0A0K0K1A3 114 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 FAM240BA0A1B0GVZ2 78 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 GAGE10A6NGK3 116 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 KRTAP4-16G5E9R7 235 aaPredicted RBP3.52□□□□□ -1.85
LINC02406-201ENST00000553029 TEX46H3BTG2 121 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 RHODO00212 210 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 SYNGR2O43760 224 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 NKX2-5P52952 324 aaPredicted RBP3.52□□□□□ -1.85
LINC02406-201ENST00000553029 S100A10P60903 97 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 RRAS2P62070 204 aaPredicted RBP3.52□□□□□ -1.85
LINC02406-201ENST00000553029 RAB32Q13637 225 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 SCGB2B2Q4G0G5 96 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 IZUMO2Q6UXV1 221 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 CARD19Q96LW7 228 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 RTBDNQ9BSG5 229 aaPredicted RBP3.52□□□□□ -1.85
LINC02406-201ENST00000553029 TMEM14CQ9P0S9 112 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 TPRKBQ9Y3C4 175 aa3.52□□□□□ -1.85
LINC02406-201ENST00000553029 TRBV7-3A0A075B6L6 115 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 A0A087X002 238 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 A0A1B0GW15 77 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 RBAKDNA6NC62 111 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 LINC00587B1AMM8 73 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 FNDC10F2Z333 226 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 SMLR1H3BR10 107 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 PYYP10082 97 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 CSN1S1P47710 185 aa3.51□□□□□ -1.85
LINC02406-201ENST00000553029 GAGE2BQ13066 116 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms