RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-233	ENST00000552433		Q1T7F1	81 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	LINC00643	Q86TS7	51 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	ORMDL3	Q8N138	153 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	TMEM190	Q8WZ59	177 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	SCGB3A1	Q96QR1	104 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	CAMK2N2	Q96S95	79 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	B9D2	Q9BPU9	175 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	ZNF71	Q9NQZ8	489 aa	Predicted RBP	4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	MRPL35	Q9NZE8	188 aa	Known RBP	4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	ASPM	Q8IZT6	3477 aa		4.41	□□□□□ -1.7
LETMD1-233	ENST00000552433	FRYL	O94915	3013 aa		4.4	□□□□□ -1.7
LETMD1-233	ENST00000552433	MYO18B	Q8IUG5	2567 aa		4.4	□□□□□ -1.7
LETMD1-233	ENST00000552433	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	C3orf79	P0CE67	100 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	NPPC	P23582	126 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	KRTAP5-9	P26371	169 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	FAM104B	Q5XKR9	115 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	SOSTDC1	Q6X4U4	206 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	ZFP2	Q6ZN57	461 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	CLDND2	Q8NHS1	167 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	HIGD1B	Q9P298	99 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	LCT	P09848	1927 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	PTPRD	P23468	1912 aa		4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433	USP9X	Q93008	2570 aa	Predicted RBP	4.4	□□□□□ -1.71
LETMD1-233	ENST00000552433		A0A087WW49	117 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	TRBV6-7	A0A0A0MS04	114 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV3-16	A0A0C4DH30	117 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433		A0A1W2PQD3	144 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGLV1-44	P01699	117 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	FXYD7	P58549	80 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	TMEM256	Q8N2U0	113 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	CLEC2B	Q92478	149 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	FGFBP2	Q9BYJ0	223 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	DSCAML1	Q8TD84	2053 aa		4.39	□□□□□ -1.71
LETMD1-233	ENST00000552433	SPAG17	Q6Q759	2223 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	PTPRB	P23467	1997 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV1OR15-9	A0A0B4J2B8	117 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGKV1-39	P01597	117 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGKV1D-39	P04432	117 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	REG3G	Q6UW15	175 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	C2orf66	Q6UXQ4	117 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433		Q6ZRP5	223 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	C2orf91	Q6ZV80	131 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	MED12L	Q86YW9	2145 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	TOMM5	Q8N4H5	51 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433		Q8N7P7	452 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	NABP2	Q9BQ15	211 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	CLEC7A	Q9BXN2	247 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	CELA1	Q9UNI1	258 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	TRAPPC1	Q9Y5R8	145 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	FRY	Q5TBA9	3013 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	GREB1	Q4ZG55	1949 aa		4.38	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGLV4-3	A0A075B6K6	122 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV3-43	A0A0B4J1X8	118 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV3-72	A0A0B4J1Y9	119 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGKV1-6	A0A0C4DH72	117 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	TCRBV4S1A1T	A0A5B7	111 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	SRRM5	B3KS81	715 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV3-13	P01766	116 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	PIRT	P0C851	137 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	RNASE2	P10153	161 aa	Known RBP	4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	TSPEAR-AS2	P59090	65 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	RHOH	Q15669	191 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	SPANXN1	Q5VSR9	72 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	RPL7L1	Q6DKI1	246 aa	Known RBP	4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	SLC48A1	Q6P1K1	146 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	LYPD2	Q6UXB3	125 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	CYB561D1	Q8N8Q1	229 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	SPTA1	P02549	2419 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	SPEG	Q15772	3267 aa		4.37	□□□□□ -1.71
LETMD1-233	ENST00000552433	ARHGAP21	Q5T5U3	1957 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	EXPH5	Q8NEV8	1989 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	SHROOM3	Q8TF72	1996 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	TANC2	Q9HCD6	1990 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	TRPM6	Q9BX84	2022 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	ZZEF1	O43149	2961 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	ZNF462	Q96JM2	2506 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGLV3-9	A0A075B6K5	115 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	TRAV3	A0A0B4J244	114 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV1-24	A0A0C4DH33	117 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	APCS	P02743	223 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV3-30-3	P0DP02	117 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	PEBP1	P30086	187 aa	Known RBP	4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	DYNLT1	P63172	113 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	ZNF791	Q3KP31	576 aa	Predicted RBP	4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	MRPL51	Q4U2R6	128 aa	Known RBP	4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	DEFB121	Q5J5C9	76 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	C9orf66	Q5T8R8	295 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGFL3	Q6UXB1	125 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	C16orf47	Q6ZP98	133 aa	Predicted RBP	4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	BAGE3	Q86Y29	109 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	BAGE2	Q86Y30	109 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	NPB	Q8NG41	125 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	CHCHD1	Q96BP2	118 aa	Known RBP	4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	LINC00467	Q9BRT7	94 aa		4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	NYNRIN	Q9P2P1	1898 aa	Known RBP	4.36	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGLV1-50	A0A075B6I6	118 aa		4.35	□□□□□ -1.71
LETMD1-233	ENST00000552433	IGHV3-35	A0A0C4DH35	117 aa		4.35	□□□□□ -1.71
LETMD1-233	ENST00000552433	CRYM-AS1	A6NIL9	109 aa		4.35	□□□□□ -1.71
LETMD1-233	ENST00000552433	RPL37AP8	A6NKH3	93 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms