RNA–Protein interactions for RNA: ENST00000551787.5

BRF1-219, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-219ENST00000551787 CRYGDP07320 174 aa11.34□□□□□ -0.59
BRF1-219ENST00000551787 DNAH10OSP0CZ25 163 aa11.34□□□□□ -0.59
BRF1-219ENST00000551787 BCL2P10415 239 aa11.34□□□□□ -0.59
BRF1-219ENST00000551787 TIRAPP58753 221 aa11.34□□□□□ -0.59
BRF1-219ENST00000551787 OR10J3Q5JRS4 329 aa11.34□□□□□ -0.59
BRF1-219ENST00000551787 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
BRF1-219ENST00000551787 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
BRF1-219ENST00000551787 Q6ZRN7 208 aaPredicted RBP11.33□□□□□ -0.6
BRF1-219ENST00000551787 GTSF1LQ9H1H1 148 aa11.33□□□□□ -0.6
BRF1-219ENST00000551787 VAX2Q9UIW0 290 aa11.33□□□□□ -0.6
BRF1-219ENST00000551787 TRAV8-6A0A0B4J262 113 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 C16orf90A8MZG2 172 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 RHODO00212 210 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 PDE6DO43924 150 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 GZMBP10144 247 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 GNG4P50150 75 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 SPATA12Q7Z6I5 190 aa11.32□□□□□ -0.6
BRF1-219ENST00000551787 BTF3P20290 206 aaKnown RBP11.31□□□□□ -0.6
BRF1-219ENST00000551787 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
BRF1-219ENST00000551787 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
BRF1-219ENST00000551787 LRP1BQ9NZR2 4599 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 TRBV20OR9-2A0A075B6H5 130 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 IGHV3-30P01768 117 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 IGHV3-33P01772 117 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 IGHV3-30-3P0DP02 117 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 IGHV3-30-5P0DP03 117 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 KRTAP10-2P60368 255 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 LELP1Q5T871 98 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 OR2D3Q8NGH3 330 aa11.3□□□□□ -0.6
BRF1-219ENST00000551787 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
BRF1-219ENST00000551787 RBFOX3A6NFN3 312 aa11.29□□□□□ -0.6
BRF1-219ENST00000551787 CXCL1P09341 107 aa11.29□□□□□ -0.6
BRF1-219ENST00000551787 LINC00694P0DN24 101 aa11.29□□□□□ -0.6
BRF1-219ENST00000551787 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■□□ 19.1
BRF1-219ENST00000551787 SPANXN1Q5VSR9 72 aa11.29□□□□□ -0.6
BRF1-219ENST00000551787 Q8N3U1 123 aa11.29□□□□□ -0.6
BRF1-219ENST00000551787 TPPP3Q9BW30 176 aa11.29□□□□□ -0.6
BRF1-219ENST00000551787 SNAI2O43623 268 aa11.28□□□□□ -0.6
BRF1-219ENST00000551787 OR5AL1P0C617 328 aa11.28□□□□□ -0.6
BRF1-219ENST00000551787 BLOC1S1P78537 153 aa11.28□□□□□ -0.6
BRF1-219ENST00000551787 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
BRF1-219ENST00000551787 NFE4Q86UQ8 179 aa11.28□□□□□ -0.6
BRF1-219ENST00000551787 C19orf71A6NCJ1 209 aa11.27□□□□□ -0.61
BRF1-219ENST00000551787 C10orf126Q8N4M7 172 aa11.27□□□□□ -0.61
BRF1-219ENST00000551787 F5H697 171 aa11.26□□□□□ -0.61
BRF1-219ENST00000551787 K7EP13 123 aa11.26□□□□□ -0.61
BRF1-219ENST00000551787 P01737 135 aa11.26□□□□□ -0.61
BRF1-219ENST00000551787 TAGLN2P37802 199 aaKnown RBP11.26□□□□□ -0.61
BRF1-219ENST00000551787 ZNF56Q15929 161 aa11.26□□□□□ -0.61
BRF1-219ENST00000551787 OCC1Q8TAD7 63 aa11.26□□□□□ -0.61
BRF1-219ENST00000551787 Q9HAA7 133 aa11.26□□□□□ -0.61
BRF1-219ENST00000551787 FER1L6-AS1Q8NA97 138 aa11.25□□□□□ -0.61
BRF1-219ENST00000551787 SMIM12Q96EX1 92 aa11.25□□□□□ -0.61
BRF1-219ENST00000551787 IBA57-AS1B1ANH7 110 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 IGLC6P0CF74 106 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 CEBPGP53567 150 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
BRF1-219ENST00000551787 RAB4BP61018 213 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 NUDT10Q8NFP7 164 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 NUDT11Q96G61 164 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 DNAH5Q8TE73 4624 aa11.24□□□□□ -0.61
BRF1-219ENST00000551787 A0A087WTM6 91 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 K7EN84 100 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 SMIM17P0DL12 118 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 ERVFC1-1P60608 527 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 RPL36AP83881 106 aaKnown RBP11.23□□□□□ -0.61
BRF1-219ENST00000551787 LYPD6BQ8NI32 183 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 RPL36ALQ969Q0 106 aaKnown RBP11.23□□□□□ -0.61
BRF1-219ENST00000551787 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
BRF1-219ENST00000551787 HSPG2P98160 4391 aa11.23□□□□□ -0.61
BRF1-219ENST00000551787 TRBV7-3A0A075B6L6 115 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 A0A087WWC5 75 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 EREGO14944 169 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 UBE2D3P61077 147 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 UBE2D2P62837 147 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 TOR2AQ5JU69 321 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 DAZ4Q86SG3 579 aaKnown RBP11.22□□□□□ -0.61
BRF1-219ENST00000551787 NEXN-AS1Q8NBZ9 246 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 DAZ3Q9NR90 486 aaKnown RBP11.22□□□□□ -0.61
BRF1-219ENST00000551787 KIF25-AS1Q9Y6Z4 181 aa11.22□□□□□ -0.61
BRF1-219ENST00000551787 PSCAO43653 123 aa11.21□□□□□ -0.61
BRF1-219ENST00000551787 AP1S3Q96PC3 154 aa11.21□□□□□ -0.61
BRF1-219ENST00000551787 EIF5A2Q9GZV4 153 aaKnown RBP11.21□□□□□ -0.61
BRF1-219ENST00000551787 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
BRF1-219ENST00000551787 MGPP08493 103 aa11.2□□□□□ -0.62
BRF1-219ENST00000551787 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
BRF1-219ENST00000551787 OR10G8Q8NGN5 311 aa11.2□□□□□ -0.62
BRF1-219ENST00000551787 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
BRF1-219ENST00000551787 RYR1P21817 5038 aa11.19□□□□□ -0.62
BRF1-219ENST00000551787 TMEM250H0YL14 139 aa11.19□□□□□ -0.62
BRF1-219ENST00000551787 CACNG7P62955 275 aa11.19□□□□□ -0.62
BRF1-219ENST00000551787 RPP21Q9H633 154 aaKnown RBP11.19□□□□□ -0.62
BRF1-219ENST00000551787 F2Z2F3 143 aa11.18□□□□□ -0.62
BRF1-219ENST00000551787 NTF3P20783 257 aa11.18□□□□□ -0.62
BRF1-219ENST00000551787 NIT1Q86X76 327 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms