RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 DUSP21Q9H596 190 aa1.26□□□□□ -2.21
PTCH1-223ENST00000551623 WFDC1Q9HC57 220 aa1.26□□□□□ -2.21
PTCH1-223ENST00000551623 IFT46Q9NQC8 304 aa1.26□□□□□ -2.21
PTCH1-223ENST00000551623 TMEM14CQ9P0S9 112 aa1.26□□□□□ -2.21
PTCH1-223ENST00000551623 MUC17Q685J3 4493 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 A0A0B4J2A0 478 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 PIGBOS1A0A0B4J2F0 54 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 A0A1W2PNN7 141 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 DUXBA0A1W2PPF3 345 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 C5orf51A6NDU8 294 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 WRBO00258 174 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 TSPAN13O95857 204 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 PMP2P02689 132 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 MT-ND6P03923 174 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 ANGP03950 147 aaKnown RBP1.25□□□□□ -2.21
PTCH1-223ENST00000551623 TYMSP04818 313 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 GNAO1P09471 354 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 OR5G3P0C626 314 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 RNASE3P12724 160 aaKnown RBP1.25□□□□□ -2.21
PTCH1-223ENST00000551623 AKR1C4P17516 323 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 RBX1P62877 108 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 REG3AQ06141 175 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 SP6Q3SY56 376 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 HIGD2BQ4VC39 106 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 C1orf137Q5JT78 98 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 MUC21Q5SSG8 566 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 C1orf146Q5VVC0 180 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 CFAP161Q6P656 301 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 KCNIP4Q6PIL6 250 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00173Q6ZV60 143 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00305Q7Z4B0 112 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 PACRGLQ8N7B6 248 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 C15orf54Q8N8G6 183 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 OR51S1Q8NGJ8 323 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 OR5H6Q8NGV6 325 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 TYMSOSQ8TAI1 123 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 RETNLBQ9BQ08 111 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 SHPKQ9UHJ6 478 aa1.25□□□□□ -2.21
PTCH1-223ENST00000551623 MACF1Q9UPN3 7388 aaKnown RBP1.25□□□□□ -2.21
PTCH1-223ENST00000551623 TRBV7-3A0A075B6L6 115 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 IGKV2-40A0A087WW87 121 aaPredicted RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 PGPEP1LA6NFU8 196 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 GNRH2O43555 120 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 COX7A2P2O60397 106 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 TNFAIP8O95379 198 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 IGKV2D-40P01614 121 aaPredicted RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 PGAM2P15259 253 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 PRSS3P35030 304 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 RAB2AP61019 212 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 CYCSP99999 105 aaKnown RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 AKR1C1Q04828 323 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 IQCJQ1A5X6 159 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 FAM229BQ4G0N7 80 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 TMEM97Q5BJF2 176 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 DNLZQ5SXM8 178 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 PRR27Q6MZM9 219 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 NTM-AS1Q6ZSK4 140 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 C8orf59Q8N0T1 100 aaPredicted RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00269Q8N2A0 174 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 C14orf178Q8N769 122 aaPredicted RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 C20orf203Q8NBC4 194 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 CCDC197Q8NCU1 140 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 OR11H4Q8NGC9 324 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 OR13C8Q8NGS7 320 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 RNASE11Q8TAA1 199 aaKnown RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 MITD1Q8WV92 249 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 PYDC1Q8WXC3 89 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 ASB13Q8WXK3 278 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00526Q96FQ7 95 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 RTBDNQ9BSG5 229 aaPredicted RBP1.24□□□□□ -2.21
PTCH1-223ENST00000551623 FAM107BQ9H098 131 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 ARL6Q9H0F7 186 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 NAA60Q9H7X0 242 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 NPVFQ9HCQ7 196 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00846Q9NV44 126 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 COPZ2Q9P299 210 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 COMMD3Q9UBI1 195 aa1.24□□□□□ -2.21
PTCH1-223ENST00000551623 TRAV21A0A0B4J279 112 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 A0A1B0GVG6 124 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 H3BTX0 84 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 AGPAT2O15120 278 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 SYNGR2O43760 224 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 ZNF861PO60384 105 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 MED6O75586 246 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 PTTG1O95997 202 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 FGF6P10767 208 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 CAV2P51636 162 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 ZNF674Q2M3X9 581 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 KRTAP13-2Q52LG2 175 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 C9orf116Q5BN46 136 aaPredicted RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 RNASE10Q5GAN6 216 aaKnown RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 UBE2NLQ5JXB2 153 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 C10orf113Q5VZT2 155 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 C22orf42Q6IC83 251 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 TMEM14EPQ6UXP3 125 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 IZUMO2Q6UXV1 221 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 EXOC3-AS1Q8N2X6 119 aa1.23□□□□□ -2.21
PTCH1-223ENST00000551623 C12orf45Q8N5I9 185 aaPredicted RBP1.23□□□□□ -2.21
PTCH1-223ENST00000551623 LINC00304Q8N9R0 145 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms