RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 V9GYH0 126 aa1.42□□□□□ -2.18
CPSF6-207ENST00000551516 TRAV12-3A0A0B4J271 114 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 LOC100506127A0A0U1RQW1 187 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 C7orf66A4D0T2 115 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 C7orf71A4D174 169 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 A6NDN8 102 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 FAM24AA6NFZ4 105 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 SYNGR2O43760 224 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 HYPMO75409 117 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 ADAP1O75689 374 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 SFT2D2O95562 160 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 SLC25A5P05141 298 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 OR4E1P0C645 316 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 TLX1NBP0CAT3 122 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 RNASE3P12724 160 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 RPL7P18124 248 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 NUP62P37198 522 aaPredicted RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 GALR1P47211 349 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 ZNF80P51504 273 aaPredicted RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 BCAP31P51572 246 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 AKR1C2P52895 323 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 TAS2R30P59541 319 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 TSPAN5P62079 268 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 LSM3P62310 102 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 POLR2GP62487 172 aaKnown RBP eCLIP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 HIST1H1AQ02539 215 aaPredicted RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 PPP1R1AQ13522 171 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 ZNF266Q14584 549 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 ZNF846Q147U1 533 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 NEDD8Q15843 81 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 TMEM128Q5BJH2 165 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 RNASE10Q5GAN6 216 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 GCSAMLQ5JQS6 135 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 ENHOQ6UWT2 76 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 Q6ZRU5 148 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 SLC25A29Q8N8R3 303 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 OR1S1Q8NH92 325 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 SUN5Q8TC36 379 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 BLNKQ8WV28 456 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 FXYD5Q96DB9 178 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 TIMM17AQ99595 171 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 PBDC1Q9BVG4 233 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 ARV1Q9H2C2 271 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 RPP21Q9H633 154 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 IFT46Q9NQC8 304 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 MRPL16Q9NX20 251 aaKnown RBP1.41□□□□□ -2.18
CPSF6-207ENST00000551516 COMMD3Q9UBI1 195 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 KLK12Q9UKR0 248 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 LY96Q9Y6Y9 160 aa1.41□□□□□ -2.18
CPSF6-207ENST00000551516 MUC17Q685J3 4493 aa1.4□□□□□ -2.18
CPSF6-207ENST00000551516 TRGV1A0A0A0MS02 117 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 TRAV4A0A0B4J268 109 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 A0A0J9YXV3 536 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 TRBV6-4A0A1B0GX49 114 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 CEBPZOSA8MTT3 80 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 PLA2G10O15496 165 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 GNRH2O43555 120 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 SNAI2O43623 268 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 ATP6V1G2O95670 118 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 RLN2P04090 185 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 CRYGDP07320 174 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 OR5G3P0C626 314 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 IAPPP10997 89 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 ORM2P19652 201 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 RAB5AP20339 215 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 ASIPP42127 132 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 SLC38A11Q08AI6 406 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 PDE6HQ13956 83 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 CFAP126Q5VTH2 177 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 LCN15Q6UWW0 184 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 ZFP2Q6ZN57 461 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 NTM-AS1Q6ZSK4 140 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 DAZ4Q86SG3 579 aaKnown RBP1.4□□□□□ -2.19
CPSF6-207ENST00000551516 NIT1Q86X76 327 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 EXOC3-AS1Q8N2X6 119 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 EIF4E3Q8N5X7 224 aaKnown RBP1.4□□□□□ -2.19
CPSF6-207ENST00000551516 CYB561D1Q8N8Q1 229 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 C9orf163Q8N9P6 203 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 ZNF738Q8NE65 137 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 OR10P1Q8NGE3 313 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 COQ8AQ8NI60 647 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 BAALCQ8WXS3 180 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 LINC00477Q96M19 166 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 CAMK2N2Q96S95 79 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 C7orf50Q9BRJ6 194 aaKnown RBP1.4□□□□□ -2.19
CPSF6-207ENST00000551516 SLC50A1Q9BRV3 221 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 GGACTQ9BVM4 153 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 COPZ2Q9P299 210 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 CACFD1Q9UGQ2 172 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 HIGD1AQ9Y241 93 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 ICOSQ9Y6W8 199 aa1.4□□□□□ -2.19
CPSF6-207ENST00000551516 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 IGKV2D-24A0A075B6R9 120 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 TRAV6A0A075B6T7 132 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 IGKV2-40A0A087WW87 121 aaPredicted RBP1.39□□□□□ -2.19
CPSF6-207ENST00000551516 MUC21A0A0G2JKD1 596 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 A0A1B0GVX0 72 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 IGSF23A1L1A6 192 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 C9orf170A2RU37 121 aa1.39□□□□□ -2.19
CPSF6-207ENST00000551516 RBAKDNA6NC62 111 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms