RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 IGKV3D-20A0A0C4DH25 116 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 A0A0D9SG52 128 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 B4DEV8 164 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 SEC11BP0C7V7 166 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 ZFP2Q6ZN57 461 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 COX8CQ7Z4L0 72 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 C14orf178Q8N769 122 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 SYT8Q8NBV8 401 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 TM2D2Q9BX73 214 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
PRPF40B-215ENST00000551418 TRBV6-1A0A0K0K1D8 114 aa11.78□□□□□ -0.52
PRPF40B-215ENST00000551418 KANTRA0A1W2PQU2 76 aa11.78□□□□□ -0.52
PRPF40B-215ENST00000551418 FAM162BQ5T6X4 162 aa11.78□□□□□ -0.52
PRPF40B-215ENST00000551418 CST9LP1Q5W188 147 aa11.78□□□□□ -0.52
PRPF40B-215ENST00000551418 S100A9P06702 114 aaKnown RBP11.77□□□□□ -0.53
PRPF40B-215ENST00000551418 LGALSLQ3ZCW2 172 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-215ENST00000551418 DNLZQ5SXM8 178 aa11.77□□□□□ -0.53
PRPF40B-215ENST00000551418 UFSP1Q6NVU6 142 aa11.77□□□□□ -0.53
PRPF40B-215ENST00000551418 KRTAP29-1A8MX34 341 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-215ENST00000551418 RHODO00212 210 aa11.76□□□□□ -0.53
PRPF40B-215ENST00000551418 PLA2G1BP04054 148 aaKnown RBP11.76□□□□□ -0.53
PRPF40B-215ENST00000551418 AKR1C3P42330 323 aa11.76□□□□□ -0.53
PRPF40B-215ENST00000551418 ZNF471Q9BX82 626 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-215ENST00000551418 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
PRPF40B-215ENST00000551418 SMLR1H3BR10 107 aa11.75□□□□□ -0.53
PRPF40B-215ENST00000551418 PFDN1O60925 122 aa11.75□□□□□ -0.53
PRPF40B-215ENST00000551418 DMRTA1Q5VZB9 504 aa11.75□□□□□ -0.53
PRPF40B-215ENST00000551418 SCXQ7RTU7 201 aa11.75□□□□□ -0.53
PRPF40B-215ENST00000551418 ZC2HC1AQ96GY0 325 aa11.75□□□□□ -0.53
PRPF40B-215ENST00000551418 LRP1Q07954 4544 aaKnown RBP11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 H3BVH4 76 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 BCL2L11O43521 198 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 SH2D1AO60880 128 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 LTAP01374 205 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 KRTAP10-4P60372 401 aaPredicted RBP11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 ZNF674Q2M3X9 581 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 OR11H4Q8NGC9 324 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 FAM213BQ8TBF2 198 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 SFT2D1Q8WV19 159 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 MBD3L1Q8WWY6 194 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 PHLDA3Q9Y5J5 127 aa11.74□□□□□ -0.53
PRPF40B-215ENST00000551418 KRBOX1C9JBD0 128 aa11.73□□□□□ -0.53
PRPF40B-215ENST00000551418 TPT1P13693 172 aaKnown RBP11.73□□□□□ -0.53
PRPF40B-215ENST00000551418 CRIP1P50238 77 aa11.73□□□□□ -0.53
PRPF40B-215ENST00000551418 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
PRPF40B-215ENST00000551418 M0R036 132 aa11.72□□□□□ -0.53
PRPF40B-215ENST00000551418 PAGE4O60829 102 aa11.72□□□□□ -0.53
PRPF40B-215ENST00000551418 ARMS2P0C7Q2 107 aa11.72□□□□□ -0.53
PRPF40B-215ENST00000551418 A0A087WWC5 75 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 GRIFINA4D1Z8 144 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 H2AFB1P0C5Y9 115 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 NIT1Q86X76 327 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 ZFP82Q8N141 532 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 DEFB104AQ8WTQ1 72 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 KLK12Q9UKR0 248 aa11.71□□□□□ -0.53
PRPF40B-215ENST00000551418 RBFOX3A6NFN3 312 aa11.7□□□□□ -0.54
PRPF40B-215ENST00000551418 EIF5AL1Q6IS14 154 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-215ENST00000551418 IGKV2D-24A0A075B6R9 120 aa11.69□□□□□ -0.54
PRPF40B-215ENST00000551418 A0A087WWL8 130 aa11.69□□□□□ -0.54
PRPF40B-215ENST00000551418 TEX46H3BTG2 121 aa11.69□□□□□ -0.54
PRPF40B-215ENST00000551418 RAB5CP51148 216 aa11.69□□□□□ -0.54
PRPF40B-215ENST00000551418 CXCL1P09341 107 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 TOR2AQ5JU69 321 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 FAM74A4Q5TZK3 123 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 CIRBP-AS1Q8TBR5 109 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 UBE2WQ96B02 151 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 SFRP2Q96HF1 295 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 CHAC1Q9BUX1 264 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 MANBALQ9NQG1 85 aa11.68□□□□□ -0.54
PRPF40B-215ENST00000551418 M0R381 172 aa11.67□□□□□ -0.54
PRPF40B-215ENST00000551418 TMUB2Q71RG4 321 aa11.67□□□□□ -0.54
PRPF40B-215ENST00000551418 Q8N976 141 aa11.67□□□□□ -0.54
PRPF40B-215ENST00000551418 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
PRPF40B-215ENST00000551418 TRBV10-1A0A0K0K1A3 114 aa11.66□□□□□ -0.54
PRPF40B-215ENST00000551418 A0A1B0GV50 99 aa11.66□□□□□ -0.54
PRPF40B-215ENST00000551418 SCO2A0A1W2PP80 73 aa11.66□□□□□ -0.54
PRPF40B-215ENST00000551418 BAGE2Q86Y30 109 aa11.66□□□□□ -0.54
PRPF40B-215ENST00000551418 FAT3Q8TDW7 4589 aa11.65□□□□□ -0.54
PRPF40B-215ENST00000551418 COX11Q9Y6N1 276 aa11.65□□□□□ -0.54
PRPF40B-215ENST00000551418 URGCP-MRPS24S4R325 110 aa11.65□□□□□ -0.54
PRPF40B-215ENST00000551418 HMCN2Q8NDA2 5059 aa11.65□□□□□ -0.54
PRPF40B-215ENST00000551418 RPL36AP83881 106 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-215ENST00000551418 RPL36ALQ969Q0 106 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-215ENST00000551418 RMI2Q96E14 147 aa11.64□□□□□ -0.55
PRPF40B-215ENST00000551418 MLST8Q9BVC4 326 aa11.64□□□□□ -0.55
PRPF40B-215ENST00000551418 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
PRPF40B-215ENST00000551418 KCNIP4Q6PIL6 250 aa11.63□□□□□ -0.55
PRPF40B-215ENST00000551418 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-215ENST00000551418 UBE2D3P61077 147 aa11.62□□□□□ -0.55
PRPF40B-215ENST00000551418 UBE2D2P62837 147 aa11.62□□□□□ -0.55
PRPF40B-215ENST00000551418 ATRAIDQ6UW56 229 aa11.62□□□□□ -0.55
PRPF40B-215ENST00000551418 ENHOQ6UWT2 76 aa11.62□□□□□ -0.55
PRPF40B-215ENST00000551418 CHCHD7Q9BUK0 85 aa11.62□□□□□ -0.55
PRPF40B-215ENST00000551418 GNG13Q9P2W3 67 aa11.62□□□□□ -0.55
PRPF40B-215ENST00000551418 TRBV7-3A0A075B6L6 115 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 A0A087WX48 190 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 IFNA1P01562 189 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 IGLV2-8P01709 118 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 OR5AL1P0C617 328 aa11.61□□□□□ -0.55
PRPF40B-215ENST00000551418 RPL35P42766 123 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms