RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 MRAP2Q96G30 205 aa7.45□□□□□ -1.22
NEK3-203ENST00000551355 MRPL18Q9H0U6 180 aaKnown RBP7.45□□□□□ -1.22
NEK3-203ENST00000551355 MRPL16Q9NX20 251 aaKnown RBP7.45□□□□□ -1.22
NEK3-203ENST00000551355 CMYA5Q8N3K9 4069 aa7.45□□□□□ -1.22
NEK3-203ENST00000551355 RAB4AP20338 218 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 DEFA6Q01524 100 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 CFAP126Q5VTH2 177 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 Q6ZTI0 123 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 C14orf178Q8N769 122 aaPredicted RBP7.44□□□□□ -1.22
NEK3-203ENST00000551355 POM121L12Q8N7R1 296 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 OR4C5Q8NGB2 326 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 DKK2Q9UBU2 259 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 LAMTOR2Q9Y2Q5 125 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 NBEAL1Q6ZS30 2694 aa7.44□□□□□ -1.22
NEK3-203ENST00000551355 NOTCH1P46531 2555 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 C1orf196B1AJZ1 125 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 H7C1H1 209 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 GAGE7O76087 117 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 TRGC2P03986 189 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 CRYGDP07320 174 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 SLAQ13239 276 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 FAM222AQ5U5X8 452 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 AMN1Q8IY45 258 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 ORMDL3Q8N138 153 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 PGPEP1Q9NXJ5 209 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 KIF25-AS1Q9Y6Z4 181 aa7.43□□□□□ -1.22
NEK3-203ENST00000551355 A0A087WWL8 130 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 F5H697 171 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 CKS2P33552 79 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 DAD1P61803 113 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 FAM74A4Q5TZK3 123 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 UFSP1Q6NVU6 142 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 RNF185Q96GF1 192 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 EDA2RQ9HAV5 297 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 RETNQ9HD89 108 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 U3KQK5 164 aa7.42□□□□□ -1.22
NEK3-203ENST00000551355 DNAH3Q8TD57 4116 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 PHOX2AO14813 284 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 MGPP08493 103 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 DEFB130BP0DP73 79 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 DEFB130AP0DP74 79 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 LINC00315P59091 139 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 RAB5BP61020 215 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 ZNF56Q15929 161 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 MRPL51Q4U2R6 128 aaKnown RBP7.41□□□□□ -1.22
NEK3-203ENST00000551355 SAMD10Q9BYL1 202 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 JPT2Q9H910 190 aa7.41□□□□□ -1.22
NEK3-203ENST00000551355 DEFB4AO15263 64 aa7.4□□□□□ -1.22
NEK3-203ENST00000551355 IGHV3-53P01767 116 aa7.4□□□□□ -1.22
NEK3-203ENST00000551355 DNHD1Q96M86 4753 aa7.4□□□□□ -1.22
NEK3-203ENST00000551355 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 A0A0J9YWU9 116 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 TRBV6-4A0A1B0GX49 114 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 D6R8Y8 96 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 ATP5G1P05496 136 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 SUMO4Q6EEV6 95 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
NEK3-203ENST00000551355 ALKBH7Q9BT30 221 aaPredicted RBP7.39□□□□□ -1.23
NEK3-203ENST00000551355 M0QY20 66 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 SRIP30626 198 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 KIAA1644Q3SXP7 199 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 OR10J3Q5JRS4 329 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 C11orf45Q8TAV5 145 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 DNAJC30Q96LL9 226 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 C20orf78Q9BR46 151 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 NIT2Q9NQR4 276 aa7.38□□□□□ -1.23
NEK3-203ENST00000551355 IGHV3-73A0A0B4J1V6 119 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 TRBV6-5A0A0K0K1A5 114 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 PRSS47A8MTI9 375 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 TNFRSF6BO95407 300 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 GATA1P15976 413 aaPredicted RBP7.37□□□□□ -1.23
NEK3-203ENST00000551355 Q0VG73 95 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 FHL2Q14192 279 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 RHOHQ15669 191 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 MAP1LC3AQ9H492 121 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 PRO0255Q9UI72 69 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 CELA1Q9UNI1 258 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 HHLA3Q9XRX5 114 aa7.37□□□□□ -1.23
NEK3-203ENST00000551355 MUC4Q99102 2169 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 TRAV26-2A0A0B4J265 109 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 K7EQD1 137 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 TCAPO15273 167 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BKO60814 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BJP06899 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BOP23527 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BBP33778 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BDP58876 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST1H2BCP62807 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 RPL32P62910 135 aaKnown RBP7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST2H2BEQ16778 126 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 C12orf74Q32Q52 190 aa7.36□□□□□ -1.23
NEK3-203ENST00000551355 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.36□□□□□ -1.23
NEK3-203ENST00000551355 NRACQ8N912 160 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms