RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 SFT2D1Q8WV19 159 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 MBD3L1Q8WWY6 194 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 FRZBQ92765 325 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 RMI2Q96E14 147 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 SFRP2Q96HF1 295 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 Q9HAA7 133 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
VTI1BP3-201ENST00000550220 APOBP04114 4563 aaKnown RBP7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 TRBV10-1A0A0K0K1A3 114 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 KANTRA0A1W2PQU2 76 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 M0R036 132 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 PFDN1O60925 122 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 C1QBP02746 253 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 XGP55808 180 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 ELOBQ15370 118 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 KCNIP4Q6PIL6 250 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 Q8N814 137 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 TMEM70Q9BUB7 260 aa7.28□□□□□ -1.24
VTI1BP3-201ENST00000550220 GRIFINA4D1Z8 144 aa7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 PAGE4O60829 102 aa7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 FUSP35637 526 aaKnown RBP eCLIP7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 FAM74A4Q5TZK3 123 aa7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 CHCHD7Q9BUK0 85 aa7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 SAMD10Q9BYL1 202 aa7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 JPT2Q9H910 190 aa7.27□□□□□ -1.25
VTI1BP3-201ENST00000550220 M0R381 172 aa7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 CXCL1P09341 107 aa7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 H2AFB1P0C5Y9 115 aa7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 RPL36AP83881 106 aaKnown RBP7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 FAM213BQ8TBF2 198 aa7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 RPL36ALQ969Q0 106 aaKnown RBP7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 ZNF471Q9BX82 626 aaPredicted RBP7.26□□□□□ -1.25
VTI1BP3-201ENST00000550220 TRBV7-3A0A075B6L6 115 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 TMSB15BA0A087X1C1 80 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 BCL2L11O43521 198 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 INAFM2P0DMQ5 153 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 RAB4BP61018 213 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 EIF5AL1Q6IS14 154 aaKnown RBP7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 NIT1Q86X76 327 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 BAGE2Q86Y30 109 aa7.25□□□□□ -1.25
VTI1BP3-201ENST00000550220 A0A087WWL8 130 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 A0A087WX48 190 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 TEX46H3BTG2 121 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 RAB5CP51148 216 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 PKIAP61925 76 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 DAZ4Q86SG3 579 aaKnown RBP7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 Q8N976 141 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 OR10G8Q8NGN5 311 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 DAZ3Q9NR90 486 aaKnown RBP7.24□□□□□ -1.25
VTI1BP3-201ENST00000550220 SMLR1H3BR10 107 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 OR5AL1P0C617 328 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 UBE2D3P61077 147 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 UBE2D2P62837 147 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 Q0VG73 95 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 TMEM97Q5BJF2 176 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 Q5VSD8 79 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 TMUB2Q71RG4 321 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 MANBALQ9NQG1 85 aa7.23□□□□□ -1.25
VTI1BP3-201ENST00000550220 TRAV1-1A0A0B4J248 108 aa7.22□□□□□ -1.25
VTI1BP3-201ENST00000550220 SPANXN1Q5VSR9 72 aa7.22□□□□□ -1.25
VTI1BP3-201ENST00000550220 Q9UF83 564 aa7.22□□□□□ -1.25
VTI1BP3-201ENST00000550220 A0A1B0GV50 99 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 SCO2A0A1W2PP80 73 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 SNAI2O43623 268 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 SMIM17P0DL12 118 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 ZNF56Q15929 161 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 SMIM12Q96EX1 92 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
VTI1BP3-201ENST00000550220 IGKV2D-24A0A075B6R9 120 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 TRBV6-8A0A0A6YYG3 113 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 RBFOX3A6NFN3 312 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 TMEM262E9PQX1 116 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 F5H697 171 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 RPL35P42766 123 aaKnown RBP7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 RPS20P60866 119 aaKnown RBP7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 C14orf177Q52M58 125 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 PRR27Q6MZM9 219 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 Q8N3U1 123 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 OR10AG1Q8NH19 301 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 DAZAP1Q96EP5 407 aaKnown RBP7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 BIN3Q9NQY0 253 aa7.2□□□□□ -1.26
VTI1BP3-201ENST00000550220 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 SMR3BP02814 79 aaPredicted RBP7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 RPL19P84098 196 aaKnown RBP7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 ATRAIDQ6UW56 229 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 BAALCQ8WXS3 180 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 C11orf52Q96A22 123 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 UBE2WQ96B02 151 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 AP1S3Q96PC3 154 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 GNG13Q9P2W3 67 aa7.19□□□□□ -1.26
VTI1BP3-201ENST00000550220 H7C1H1 209 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 PDE6DO43924 150 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 IFNA1P01562 189 aa7.18□□□□□ -1.26
VTI1BP3-201ENST00000550220 CRPP02741 224 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms