RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CXorf51AA0A1B0GTR3 108 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 SPAARA0A1B0GVQ0 90 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 NUPR2A6NF83 97 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 A6NIN4 97 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 IFNA17P01571 189 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 RPL7L1Q6DKI1 246 aaKnown RBP1□□□□□ -2.25
CCDC38-208ENST00000549876 SLC48A1Q6P1K1 146 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 C4orf33Q8N1A6 199 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 TSKUQ8WUA8 353 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 COA4Q9NYJ1 87 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 MRPL35Q9NZE8 188 aaKnown RBP1□□□□□ -2.25
CCDC38-208ENST00000549876 NDUFA12Q9UI09 145 aa1□□□□□ -2.25
CCDC38-208ENST00000549876 PZPP20742 1482 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 TRAV30A0A087WSZ9 112 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 TMEM218A2RU14 115 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 HIGD1CA8MV81 97 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 IGLV3-1P01715 115 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 SLC25A6P12236 298 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 IL7P13232 177 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 CBLN1P23435 193 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 NPC2P61916 151 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 HSD52Q0P140 79 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 CATR1Q13166 79 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 SPATA45Q537H7 98 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 C9orf116Q5BN46 136 aaPredicted RBP0.99□□□□□ -2.25
CCDC38-208ENST00000549876 C9orf153Q5TBE3 101 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 CSAG1Q6PB30 78 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 Q6ZS92 163 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 SVBPQ8N300 66 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 AQP10Q96PS8 301 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 MRPL36Q9P0J6 103 aaKnown RBP0.99□□□□□ -2.25
CCDC38-208ENST00000549876 ZNF142P52746 1687 aaPredicted RBP0.99□□□□□ -2.25
CCDC38-208ENST00000549876 SCRIBQ14160 1630 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 ZFYVE16Q7Z3T8 1539 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 HELZ2Q9BYK8 2649 aaKnown RBP0.99□□□□□ -2.25
CCDC38-208ENST00000549876 IFT140Q96RY7 1462 aa0.99□□□□□ -2.25
CCDC38-208ENST00000549876 CNTLNQ9NXG0 1405 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 AHNAK2Q8IVF2 5795 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 CASP8AP2Q9UKL3 1982 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 ANGP03950 147 aaKnown RBP0.98□□□□□ -2.25
CCDC38-208ENST00000549876 ATP5EP56381 51 aaPredicted RBP0.98□□□□□ -2.25
CCDC38-208ENST00000549876 PPP1R1CQ8WVI7 109 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 LSM10Q969L4 123 aaKnown RBP0.98□□□□□ -2.25
CCDC38-208ENST00000549876 LIMD2Q9BT23 127 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 WFDC10AQ9H1F0 79 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 ZGRF1Q86YA3 2104 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 PTPRMP28827 1452 aa0.98□□□□□ -2.25
CCDC38-208ENST00000549876 TRBV10-3A0A0K0K1G6 114 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 TEX49A0A1B0GTD5 131 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 TCRBV3S1A0A5B6 114 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 FAM24AA6NFZ4 105 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 H3BQ15 152 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 IGKCP01834 107 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 CCKP06307 115 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 LYNX1P0DP58 116 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 IFITM1P13164 125 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 DEFB132Q7Z7B7 95 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 Q8N8P6 123 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 ODF3Q96PU9 254 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 DLEC1Q9Y238 1755 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 SPAG17Q6Q759 2223 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 CDK12Q9NYV4 1490 aaPredicted RBP0.97□□□□□ -2.25
CCDC38-208ENST00000549876 CACNA1BQ00975 2339 aa0.97□□□□□ -2.25
CCDC38-208ENST00000549876 KMT2BQ9UMN6 2715 aaPredicted RBP0.96□□□□□ -2.26
CCDC38-208ENST00000549876 NWD2Q9ULI1 1742 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 TRAV23DV6A0A075B6W5 121 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 TMEM262E9PQX1 116 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 M0R143 59 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 SSSCA1O60232 199 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 UBE2G1P62253 170 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 CCL8P80075 99 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 ZNF818PQ6ZRF7 136 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 Q6ZSA8 131 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 C5orf38Q86SI9 138 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 SBSPONQ8IVN8 264 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 TTC9CQ8N5M4 171 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 AMELYQ99218 206 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 CTTNBP2Q8WZ74 1663 aa0.96□□□□□ -2.26
CCDC38-208ENST00000549876 KIAA0100Q14667 2235 aaKnown RBP0.96□□□□□ -2.26
CCDC38-208ENST00000549876 PRRC2BQ5JSZ5 2229 aaKnown RBP0.96□□□□□ -2.26
CCDC38-208ENST00000549876 MUC22E2RYF6 1773 aaPredicted RBP0.96□□□□□ -2.26
CCDC38-208ENST00000549876 MYH8P13535 1937 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 PARP14Q460N5 1801 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 TRAV12-3A0A0B4J271 114 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 UBE2L5PA0A1B0GUS4 154 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 OOSP1A8MZH6 123 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 SPINK8P0C7L1 97 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 RPL37AP61513 92 aaKnown RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 PKIAP61925 76 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 UBE2L3P68036 154 aaKnown RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 DCDP81605 110 aaKnown RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 IQCJQ1A5X6 159 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 XAF1Q6GPH4 301 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 CYP2G1PQ6ZSU1 146 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 COMMD6Q7Z4G1 85 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 IFI27L1Q96BM0 104 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 CYP4F30PQ9H0H9 118 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 PHRF1Q9P1Y6 1649 aaKnown RBP0.95□□□□□ -2.26
CCDC38-208ENST00000549876 ZNF609O15014 1411 aa0.95□□□□□ -2.26
CCDC38-208ENST00000549876 BLMP54132 1417 aaPredicted RBP0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms