RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PTPRQQ9UMZ3 2332 aa17.39■□□□□ 0.37
NPAS3-206ENST00000548645 C5orf56Q8N8D9 126 aa17.38■□□□□ 0.37
NPAS3-206ENST00000548645 DCHS2Q6V1P9 2916 aa17.38■□□□□ 0.37
NPAS3-206ENST00000548645 ZNF876PQ49A33 203 aa17.38■□□□□ 0.37
NPAS3-206ENST00000548645 RNF183Q96D59 192 aa17.38■□□□□ 0.37
NPAS3-206ENST00000548645 LRBAP50851 2863 aa17.38■□□□□ 0.37
NPAS3-206ENST00000548645 TRAV41A0A0B4J266 112 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 ZFAND6Q6FIF0 208 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 ZNRF2Q8NHG8 242 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 M0QXV9 152 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 SLC25A20O43772 301 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 AMELXQ99217 191 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 SUMO4Q6EEV6 95 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 UNQ9165/PRO28630Q6UXU0 137 aa17.37■□□□□ 0.37
NPAS3-206ENST00000548645 NDUFA4O00483 81 aa17.36■□□□□ 0.37
NPAS3-206ENST00000548645 ANAPC13Q9BS18 74 aa17.36■□□□□ 0.37
NPAS3-206ENST00000548645 F6UB75 175 aa17.36■□□□□ 0.37
NPAS3-206ENST00000548645 RPL11P62913 178 aaKnown RBP17.36■□□□□ 0.37
NPAS3-206ENST00000548645 TEX29Q8N6K0 151 aa17.36■□□□□ 0.37
NPAS3-206ENST00000548645 NBASA2RRP1 2371 aa17.36■□□□□ 0.37
NPAS3-206ENST00000548645 DEFB104AQ8WTQ1 72 aa17.35■□□□□ 0.37
NPAS3-206ENST00000548645 SDHAF1A6NFY7 115 aa17.34■□□□□ 0.37
NPAS3-206ENST00000548645 F5H697 171 aa17.34■□□□□ 0.37
NPAS3-206ENST00000548645 A4D1N5 150 aa17.34■□□□□ 0.37
NPAS3-206ENST00000548645 C9JAW5 83 aa17.34■□□□□ 0.37
NPAS3-206ENST00000548645 RAX2Q96IS3 184 aa17.34■□□□□ 0.37
NPAS3-206ENST00000548645 ATRXP46100 2492 aa17.33■□□□□ 0.36
NPAS3-206ENST00000548645 MUC4Q99102 2169 aa17.33■□□□□ 0.36
NPAS3-206ENST00000548645 IGHV3-33P01772 117 aa17.33■□□□□ 0.36
NPAS3-206ENST00000548645 FAM159AQ6UWV7 190 aa17.33■□□□□ 0.36
NPAS3-206ENST00000548645 LINC00527Q9UJ94 153 aa17.33■□□□□ 0.36
NPAS3-206ENST00000548645 TRBV27A0A0K0K1C4 114 aa17.32■□□□□ 0.36
NPAS3-206ENST00000548645 JPT2Q9H910 190 aa17.32■□□□□ 0.36
NPAS3-206ENST00000548645 MED13LQ71F56 2210 aa17.32■□□□□ 0.36
NPAS3-206ENST00000548645 CCL21O00585 134 aa17.32■□□□□ 0.36
NPAS3-206ENST00000548645 C19orf54Q5BKX5 351 aa17.32■□□□□ 0.36
NPAS3-206ENST00000548645 NPFFO15130 113 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 A0A087WWL8 130 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 LEPROTO15243 131 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 TRBV12-3P01733 135 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 A0A0B4J2C4 111 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 TMEM219Q86XT9 240 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 TMEM263Q8WUH6 116 aaKnown RBP17.31■□□□□ 0.36
NPAS3-206ENST00000548645 CITED1Q99966 193 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 MOB4Q9Y3A3 225 aa17.31■□□□□ 0.36
NPAS3-206ENST00000548645 TRBV6-5A0A0K0K1A5 114 aa17.3■□□□□ 0.36
NPAS3-206ENST00000548645 P0DMU3 169 aa17.3■□□□□ 0.36
NPAS3-206ENST00000548645 FAM231AP0DMU4 169 aa17.3■□□□□ 0.36
NPAS3-206ENST00000548645 FAM231CP0DMU5 169 aa17.3■□□□□ 0.36
NPAS3-206ENST00000548645 TRPT1Q86TN4 253 aaKnown RBP17.3■□□□□ 0.36
NPAS3-206ENST00000548645 KLLNB2CW77 178 aa17.29■□□□□ 0.36
NPAS3-206ENST00000548645 IGHV1-69P01742 117 aa17.29■□□□□ 0.36
NPAS3-206ENST00000548645 CRIP2P52943 208 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-206ENST00000548645 IGKV3-7A0A075B6H7 116 aa17.28■□□□□ 0.36
NPAS3-206ENST00000548645 TMEM223A0PJW6 202 aa17.28■□□□□ 0.36
NPAS3-206ENST00000548645 LGALS9O00182 355 aa17.28■□□□□ 0.36
NPAS3-206ENST00000548645 TRAV2A0A0B4J234 112 aa17.28■□□□□ 0.36
NPAS3-206ENST00000548645 CDSNQ15517 529 aa17.28■□□□□ 0.36
NPAS3-206ENST00000548645 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.27■□□□□ 0.36
NPAS3-206ENST00000548645 SRD5A1P18405 259 aa17.27■□□□□ 0.36
NPAS3-206ENST00000548645 GATA3P23771 443 aa17.27■□□□□ 0.36
NPAS3-206ENST00000548645 ZNF256Q9Y2P7 627 aaPredicted RBP17.27■□□□□ 0.36
NPAS3-206ENST00000548645 H7C2G1 150 aa17.27■□□□□ 0.35
NPAS3-206ENST00000548645 EIF4EBP3O60516 100 aaPredicted RBP17.27■□□□□ 0.35
NPAS3-206ENST00000548645 GAGE5Q13069 117 aa17.27■□□□□ 0.35
NPAS3-206ENST00000548645 GAGE6Q13070 117 aa17.27■□□□□ 0.35
NPAS3-206ENST00000548645 MUSTN1Q8IVN3 82 aa17.26■□□□□ 0.35
NPAS3-206ENST00000548645 RHOHQ15669 191 aa17.26■□□□□ 0.35
NPAS3-206ENST00000548645 ATXN8Q156A1 80 aa17.26■□□□□ 0.35
NPAS3-206ENST00000548645 RELNP78509 3460 aa17.26■□□□□ 0.35
NPAS3-206ENST00000548645 SNCGO76070 127 aa17.25■□□□□ 0.35
NPAS3-206ENST00000548645 Q1RN00 199 aa17.25■□□□□ 0.35
NPAS3-206ENST00000548645 NSUN5P1Q3KNT7 163 aa17.25■□□□□ 0.35
NPAS3-206ENST00000548645 RHPN1-AS1Q9BWJ2 59 aa17.25■□□□□ 0.35
NPAS3-206ENST00000548645 GAGE2BQ13066 116 aa17.24■□□□□ 0.35
NPAS3-206ENST00000548645 GAGE2EQ4V326 116 aa17.24■□□□□ 0.35
NPAS3-206ENST00000548645 FAM74A4Q5TZK3 123 aa17.24■□□□□ 0.35
NPAS3-206ENST00000548645 GAGE2DQ9UEU5 116 aa17.24■□□□□ 0.35
NPAS3-206ENST00000548645 RHODO00212 210 aa17.24■□□□□ 0.35
NPAS3-206ENST00000548645 NTN5Q8WTR8 489 aaPredicted RBP17.24■□□□□ 0.35
NPAS3-206ENST00000548645 USMG5Q96IX5 58 aa17.24■□□□□ 0.35
NPAS3-206ENST00000548645 LINC01620Q4KN68 170 aa17.23■□□□□ 0.35
NPAS3-206ENST00000548645 OPRPNQ99935 248 aaPredicted RBP17.23■□□□□ 0.35
NPAS3-206ENST00000548645 Q8N1Y9 231 aa17.23■□□□□ 0.35
NPAS3-206ENST00000548645 ZNF22P17026 224 aaPredicted RBP17.22■□□□□ 0.35
NPAS3-206ENST00000548645 A0A0J9YX75 114 aa17.22■□□□□ 0.35
NPAS3-206ENST00000548645 IGHV3-11P01762 117 aa17.22■□□□□ 0.35
NPAS3-206ENST00000548645 ADORA2A-AS1P86434 159 aa17.21■□□□□ 0.35
NPAS3-206ENST00000548645 TRAV12-3A0A0B4J271 114 aa17.21■□□□□ 0.35
NPAS3-206ENST00000548645 ZNF56Q15929 161 aa17.21■□□□□ 0.35
NPAS3-206ENST00000548645 LINC01600Q96MT4 127 aa17.21■□□□□ 0.35
NPAS3-206ENST00000548645 MDFICQ9P1T7 246 aa17.21■□□□□ 0.35
NPAS3-206ENST00000548645 M0QY20 66 aa17.2■□□□□ 0.34
NPAS3-206ENST00000548645 IGHV3-64A0A075B6Q5 118 aa17.2■□□□□ 0.34
NPAS3-206ENST00000548645 M0R2P5 195 aa17.2■□□□□ 0.34
NPAS3-206ENST00000548645 ID1P41134 155 aa17.2■□□□□ 0.34
NPAS3-206ENST00000548645 LMO4P61968 165 aa17.2■□□□□ 0.34
NPAS3-206ENST00000548645 K7ENP7 123 aa17.2■□□□□ 0.34
NPAS3-206ENST00000548645 H3BUA1 57 aa17.19■□□□□ 0.34
NPAS3-206ENST00000548645 C20orf203Q8NBC4 194 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms