RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 KIR3DS1Q14943 382 aa8.15□□□□□ -1.11
SCN8A-205ENST00000548086 TMSB15BA0A087X1C1 80 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 RBMY1BA6NDE4 496 aaKnown RBP8.14□□□□□ -1.11
SCN8A-205ENST00000548086 RBMY1EA6NEQ0 496 aaKnown RBP8.14□□□□□ -1.11
SCN8A-205ENST00000548086 NPYP01303 97 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 RBMY1DP0C7P1 496 aaKnown RBP8.14□□□□□ -1.11
SCN8A-205ENST00000548086 PTTG1IPP53801 180 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 TMEM78Q5T7P6 136 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 FOXI2Q6ZQN5 318 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 C9orf47Q6ZRZ4 202 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 TPPP3Q9BW30 176 aa8.14□□□□□ -1.11
SCN8A-205ENST00000548086 H3BMM0 161 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 PPBPP02775 128 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 FXYD7P58549 80 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 Q6ZQT7 251 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 MUC21A0A0G2JKD1 596 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 MUC21A0A140T8X8 626 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 FABP5P3A8MUU1 101 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 HLA-DRB4P13762 266 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 ANKRD39Q53RE8 183 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 MUC21Q5SSG8 566 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 PRR9Q5T870 116 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 GTSCR1Q86UQ5 136 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 BOD1L2Q8IYS8 172 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 HLA-DRB4X5D2U9 266 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 NOTCH1P46531 2555 aa8.13□□□□□ -1.11
SCN8A-205ENST00000548086 MGAM2Q2M2H8 2515 aa8.12□□□□□ -1.11
SCN8A-205ENST00000548086 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
SCN8A-205ENST00000548086 SAMD5Q5TGI4 173 aa8.12□□□□□ -1.11
SCN8A-205ENST00000548086 Q8N1Y9 231 aa8.12□□□□□ -1.11
SCN8A-205ENST00000548086 TRAV12-2A0A075B6T6 113 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 PRSS47A8MTI9 375 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 CKS2P33552 79 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 EGFEM1PQ0D2K5 195 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 TWIST1Q15672 202 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 SPINK13Q1W4C9 94 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 AMTNQ6UX39 209 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 ZMAT4Q9H898 229 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 IGKV3D-20A0A0C4DH25 116 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 LOC389332A0A1B0GUA5 103 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 RPL35AP18077 110 aaKnown RBP8.11□□□□□ -1.11
SCN8A-205ENST00000548086 STHQ8IWL8 128 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 ZFAND2AQ8N6M9 145 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 MSRB1Q9NZV6 116 aa8.11□□□□□ -1.11
SCN8A-205ENST00000548086 IGLV2-18A0A075B6J9 118 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 IGHV4-4A0A075B6R2 117 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 H0Y8G0 127 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 SMKR1H3BMG3 65 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 SIVA1O15304 175 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 SEC11AP67812 179 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 TRPT1Q86TN4 253 aaKnown RBP8.1□□□□□ -1.11
SCN8A-205ENST00000548086 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 FAM19A4Q96LR4 140 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 FAM110AQ9BQ89 295 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 C11orf21Q9P2W6 132 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 NBEAL1Q6ZS30 2694 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 DUSP14O95147 198 aaKnown RBP8.1□□□□□ -1.11
SCN8A-205ENST00000548086 RBX1P62877 108 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 CACNG7P62955 275 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 RNASE8Q8TDE3 154 aaKnown RBP8.1□□□□□ -1.11
SCN8A-205ENST00000548086 MAP1LC3AQ9H492 121 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 CBY1Q9Y3M2 126 aa8.1□□□□□ -1.11
SCN8A-205ENST00000548086 DNAH3Q8TD57 4116 aa8.09□□□□□ -1.11
SCN8A-205ENST00000548086 CBY3A6NI87 242 aa8.09□□□□□ -1.11
SCN8A-205ENST00000548086 GAS8-AS1O95177 125 aa8.09□□□□□ -1.11
SCN8A-205ENST00000548086 ORM1P02763 201 aa8.09□□□□□ -1.11
SCN8A-205ENST00000548086 A8MTW9 85 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 SNAI2O43623 268 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 FCER1GP30273 86 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 RNASE4P34096 147 aaKnown RBP8.08□□□□□ -1.12
SCN8A-205ENST00000548086 CMC4P56277 68 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-205ENST00000548086 TMEM97Q5BJF2 176 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 NXT2Q9NPJ8 142 aaKnown RBP8.08□□□□□ -1.12
SCN8A-205ENST00000548086 RBMY1A1P0DJD3 496 aaKnown RBP8.08□□□□□ -1.12
SCN8A-205ENST00000548086 RBMY1CP0DJD4 496 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 RBMY1FQ15415 496 aaKnown RBP8.08□□□□□ -1.12
SCN8A-205ENST00000548086 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 HHLA3Q9XRX5 114 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 TIMM8BQ9Y5J9 83 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-205ENST00000548086 LENEPQ9Y5L5 61 aa8.08□□□□□ -1.12
SCN8A-205ENST00000548086 TRAV12-3A0A0B4J271 114 aa8.07□□□□□ -1.12
SCN8A-205ENST00000548086 KLLNB2CW77 178 aa8.07□□□□□ -1.12
SCN8A-205ENST00000548086 CDKN1BP46527 198 aa8.07□□□□□ -1.12
SCN8A-205ENST00000548086 ODF1Q14990 250 aa8.07□□□□□ -1.12
SCN8A-205ENST00000548086 Q8N8P6 123 aa8.07□□□□□ -1.12
SCN8A-205ENST00000548086 NRACQ8N912 160 aa8.07□□□□□ -1.12
SCN8A-205ENST00000548086 GIG44P09565 113 aaPredicted RBP8.06□□□□□ -1.12
SCN8A-205ENST00000548086 IGHV4-30-4P0DP06 118 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 HSD52Q0P140 79 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 OR4C5Q8NGB2 326 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 ODF3Q96PU9 254 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 TRAV8-6A0A0B4J262 113 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 PRM2P04554 102 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 LEPP41159 167 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 VAMP3Q15836 100 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 DKK2Q9UBU2 259 aa8.06□□□□□ -1.12
SCN8A-205ENST00000548086 C7orf71A4D174 169 aa8.05□□□□□ -1.12
SCN8A-205ENST00000548086 HIGD1BQ9P298 99 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms