RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 C10orf126Q8N4M7 172 aa6.92□□□□□ -1.3
BEST3-208ENST00000547208 STOML3Q8TAV4 291 aa6.92□□□□□ -1.3
BEST3-208ENST00000547208 A0A0D9SG52 128 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 GRIFINA4D1Z8 144 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 IBA57-AS1B1ANH7 110 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 UMAD1C9J7I0 102 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 ARMS2P0C7Q2 107 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 UBE2G1P62253 170 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
BEST3-208ENST00000547208 CDPF1Q6NVV7 123 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 SLC51BQ86UW2 128 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 Q8N3U1 123 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 C14orf178Q8N769 122 aaPredicted RBP6.91□□□□□ -1.3
BEST3-208ENST00000547208 ATP6V0E2Q8NHE4 81 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 FAM213BQ8TBF2 198 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 SFT2D1Q8WV19 159 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 GTSF1LQ9H1H1 148 aa6.91□□□□□ -1.3
BEST3-208ENST00000547208 TRAV8-6A0A0B4J262 113 aa6.9□□□□□ -1.3
BEST3-208ENST00000547208 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
BEST3-208ENST00000547208 LRCOL1A6NCL2 159 aa6.9□□□□□ -1.3
BEST3-208ENST00000547208 AKR1C3P42330 323 aa6.9□□□□□ -1.3
BEST3-208ENST00000547208 OR10J3Q5JRS4 329 aa6.9□□□□□ -1.3
BEST3-208ENST00000547208 MLST8Q9BVC4 326 aa6.9□□□□□ -1.3
BEST3-208ENST00000547208 ZNF471Q9BX82 626 aaPredicted RBP6.9□□□□□ -1.3
BEST3-208ENST00000547208 TMSB15BA0A087X1C1 80 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 A0A1B0GV50 99 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 KANTRA0A1W2PQU2 76 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 GAGE12JA6NER3 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 IGHV3-30P01768 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 IGHV3-33P01772 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 IGHV3-30-3P0DP02 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 IGHV3-30-5P0DP03 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 XGP55808 180 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 KRTAP10-1P60331 282 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 CTAG1AP78358 180 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 GAGE1Q13065 139 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 GAGE4Q13068 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 GAGE5Q13069 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 SFRP2Q96HF1 295 aa6.89□□□□□ -1.31
BEST3-208ENST00000547208 TMA7Q9Y2S6 64 aaKnown RBP6.89□□□□□ -1.31
BEST3-208ENST00000547208 A0A087WWL8 130 aa6.88□□□□□ -1.31
BEST3-208ENST00000547208 RHODO00212 210 aa6.88□□□□□ -1.31
BEST3-208ENST00000547208 TMUB2Q71RG4 321 aa6.88□□□□□ -1.31
BEST3-208ENST00000547208 SYT8Q8NBV8 401 aa6.88□□□□□ -1.31
BEST3-208ENST00000547208 PHLDA3Q9Y5J5 127 aa6.88□□□□□ -1.31
BEST3-208ENST00000547208 M0R381 172 aa6.87□□□□□ -1.31
BEST3-208ENST00000547208 S100A9P06702 114 aaKnown RBP6.87□□□□□ -1.31
BEST3-208ENST00000547208 TPT1P13693 172 aaKnown RBP6.87□□□□□ -1.31
BEST3-208ENST00000547208 CCL20P78556 96 aa6.87□□□□□ -1.31
BEST3-208ENST00000547208 RPL19P84098 196 aaKnown RBP6.87□□□□□ -1.31
BEST3-208ENST00000547208 LAGE3Q14657 143 aa6.87□□□□□ -1.31
BEST3-208ENST00000547208 FAM74A4Q5TZK3 123 aa6.87□□□□□ -1.31
BEST3-208ENST00000547208 Q9HAA7 133 aa6.87□□□□□ -1.31
BEST3-208ENST00000547208 VPS13BQ7Z7G8 4022 aa6.87□□□□□ -1.31
BEST3-208ENST00000547208 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
BEST3-208ENST00000547208 TRAV1-1A0A0B4J248 108 aa6.86□□□□□ -1.31
BEST3-208ENST00000547208 CXCL1P09341 107 aa6.86□□□□□ -1.31
BEST3-208ENST00000547208 EIF5AP63241 154 aaKnown RBP6.86□□□□□ -1.31
BEST3-208ENST00000547208 BAGE2Q86Y30 109 aa6.86□□□□□ -1.31
BEST3-208ENST00000547208 ZFP82Q8N141 532 aa6.86□□□□□ -1.31
BEST3-208ENST00000547208 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 A0A087WWC5 75 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 SNAI2O43623 268 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 PSCAO43653 123 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 WFDC2Q14508 124 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 DAZ4Q86SG3 579 aaKnown RBP6.85□□□□□ -1.31
BEST3-208ENST00000547208 Q8N814 137 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 OR10AG1Q8NH19 301 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 C11orf52Q96A22 123 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 DERL1Q9BUN8 251 aa6.85□□□□□ -1.31
BEST3-208ENST00000547208 DAZ3Q9NR90 486 aaKnown RBP6.85□□□□□ -1.31
BEST3-208ENST00000547208 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.31
BEST3-208ENST00000547208 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 IGLV2-8P01709 118 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 OR5AL1P0C617 328 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 GCSHP23434 173 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 RPL35P42766 123 aaKnown RBP6.84□□□□□ -1.31
BEST3-208ENST00000547208 UBE2D3P61077 147 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 UBE2D2P62837 147 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 PRR27Q6MZM9 219 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 NIT1Q86X76 327 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 TCTE3Q8IZS6 198 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 OR10G8Q8NGN5 311 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 MANBALQ9NQG1 85 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 GNG13Q9P2W3 67 aa6.84□□□□□ -1.31
BEST3-208ENST00000547208 TRBV7-3A0A075B6L6 115 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 IGLV5-52A0A0A0MRZ9 124 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 SULT1A2P50226 295 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 RAB5CP51148 216 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 RAB4BP61018 213 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
BEST3-208ENST00000547208 DNAJC30Q96LL9 226 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 KIF25-AS1Q9Y6Z4 181 aa6.83□□□□□ -1.32
BEST3-208ENST00000547208 TRAV8-3A0A0A6YYJ7 113 aa6.82□□□□□ -1.32
BEST3-208ENST00000547208 MUC21A0A0G2JKD1 596 aa6.82□□□□□ -1.32
BEST3-208ENST00000547208 MUC21A0A140T8X8 626 aa6.82□□□□□ -1.32
BEST3-208ENST00000547208 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
BEST3-208ENST00000547208 NEXN-AS1Q8NBZ9 246 aa6.82□□□□□ -1.32
BEST3-208ENST00000547208 TRBV20OR9-2A0A075B6H5 130 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms