RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CHAC1Q9BUX1 264 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 NBEAL2Q6ZNJ1 2754 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 TEX15Q9BXT5 2789 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 OR11H6Q8NGC7 330 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 UBE2E2Q96LR5 201 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 NF1P21359 2839 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 FGF6P10767 208 aa7.54□□□□□ -1.2
TRAF1-203ENST00000546084 IGSF10Q6WRI0 2623 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 IGKV2D-26A0A0A0MRZ7 120 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 ADARB2-AS1A8MUL3 147 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 BUB3O43684 328 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 C8orf31Q8N9H6 132 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 PPDPFQ9H3Y8 114 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 DPM2O94777 84 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 MINOS1Q5TGZ0 78 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 PHLDA1Q8WV24 401 aaPredicted RBP7.53□□□□□ -1.2
TRAF1-203ENST00000546084 RNF5Q99942 180 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 MINOS1-NBL1R4GNA1 71 aa7.53□□□□□ -1.2
TRAF1-203ENST00000546084 TEP1Q99973 2627 aaKnown RBP7.53□□□□□ -1.2
TRAF1-203ENST00000546084 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 CRYGBP07316 175 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 COX6B1P14854 86 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 SLC50A1Q9BRV3 221 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 NXT2Q9NPJ8 142 aaKnown RBP7.52□□□□□ -1.21
TRAF1-203ENST00000546084 SMAD5-AS1Q9Y6J3 95 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 IGHV3-38A0A0C4DH36 116 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 PDE6HQ13956 83 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 FAM110DQ8TAY7 271 aaPredicted RBP7.52□□□□□ -1.21
TRAF1-203ENST00000546084 CCDC140Q96MF4 163 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 GAGE13Q4V321 117 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 TTC9CQ8N5M4 171 aa7.52□□□□□ -1.21
TRAF1-203ENST00000546084 TRBV25-1A0A075B6N4 114 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 LAGE3Q14657 143 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 KLHL30-AS1Q8NEE0 82 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 KIR2DL4Q99706 377 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 FBN2P35556 2912 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 MUC4Q99102 2169 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 TRAV21A0A0B4J279 112 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 ZNF815PA8K554 130 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 H3BMG7 143 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 ZNF625Q96I27 306 aaPredicted RBP7.51□□□□□ -1.21
TRAF1-203ENST00000546084 ERG28Q9UKR5 140 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 ATRQ13535 2644 aa7.51□□□□□ -1.21
TRAF1-203ENST00000546084 HELZ2Q9BYK8 2649 aaKnown RBP7.51□□□□□ -1.21
TRAF1-203ENST00000546084 SMIM9A6NGZ8 99 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 SNRPD3P62318 126 aaKnown RBP7.5□□□□□ -1.21
TRAF1-203ENST00000546084 SRSF1Q07955 248 aaKnown RBP eCLIP7.5□□□□□ -1.21
TRAF1-203ENST00000546084 DEFB112Q30KQ8 113 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 UFSP1Q6NVU6 142 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 MSMBP08118 114 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 LMO4P61968 165 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 AJUBAQ96IF1 538 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 OPRPNQ99935 248 aaPredicted RBP7.5□□□□□ -1.21
TRAF1-203ENST00000546084 PRSS29PA6NIE9 313 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 ATP5LO75964 103 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 SEC61GP60059 68 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 RPL39P62891 51 aaKnown RBP7.5□□□□□ -1.21
TRAF1-203ENST00000546084 CFHR3Q02985 330 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 VPREB3Q9UKI3 123 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 V9GYY9 64 aa7.5□□□□□ -1.21
TRAF1-203ENST00000546084 HRNRQ86YZ3 2850 aaPredicted RBP7.49□□□□□ -1.21
TRAF1-203ENST00000546084 TRAV8-2A0A0B4J237 113 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 WI2-2373I1.2A0A1W2PRP0 233 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 DEFB131AP59861 70 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 WFDC2Q14508 124 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 ZNF876PQ49A33 203 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 TRBV6-1A0A0K0K1D8 114 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 LY6LH3BQJ8 138 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 LINC01587Q99440 93 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 TNFRSF13BO14836 293 aaPredicted RBP7.49□□□□□ -1.21
TRAF1-203ENST00000546084 IFITM1P13164 125 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 C2orf66Q6UXQ4 117 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 XCL2Q9UBD3 114 aa7.49□□□□□ -1.21
TRAF1-203ENST00000546084 TRBV7-1A0A0A6YYK4 115 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 TRAV2A0A0B4J234 112 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 NPBQ8NG41 125 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 C20orf173Q96LM9 149 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 SIRPDQ9H106 197 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 SLC25A16P16260 332 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 CEND1Q8N111 149 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 C5orf56Q8N8D9 126 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 EDA2RQ9HAV5 297 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 DAZ1Q9NQZ3 744 aaKnown RBP7.48□□□□□ -1.21
TRAF1-203ENST00000546084 TP53TG1Q9Y2A0 90 aa7.48□□□□□ -1.21
TRAF1-203ENST00000546084 SUMO2P61956 95 aaKnown RBP7.47□□□□□ -1.21
TRAF1-203ENST00000546084 PRR9Q5T870 116 aa7.47□□□□□ -1.21
TRAF1-203ENST00000546084 APRG1Q8IVJ8 170 aa7.47□□□□□ -1.21
TRAF1-203ENST00000546084 CSDC2Q9Y534 153 aaKnown RBP7.47□□□□□ -1.21
TRAF1-203ENST00000546084 U3KQK5 164 aa7.47□□□□□ -1.21
TRAF1-203ENST00000546084 MRPS12O15235 138 aaKnown RBP7.47□□□□□ -1.21
TRAF1-203ENST00000546084 LY6G5BQ8NDX9 201 aa7.47□□□□□ -1.21
TRAF1-203ENST00000546084 B4DSR2 109 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 TMEM262E9PQX1 116 aa7.46□□□□□ -1.21
TRAF1-203ENST00000546084 F8W735 103 aaPredicted RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms