RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 UMAD1C9J7I0 102 aa15.18■□□□□ 0.02
CHD4-214ENST00000545942 TPT1P13693 172 aaKnown RBP15.18■□□□□ 0.02
CHD4-214ENST00000545942 FAM74A4Q5TZK3 123 aa15.18■□□□□ 0.02
CHD4-214ENST00000545942 SFT2D1Q8WV19 159 aa15.18■□□□□ 0.02
CHD4-214ENST00000545942 TMSB15BA0A087X1C1 80 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 Q8N814 137 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 FAM213BQ8TBF2 198 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 MBD3L1Q8WWY6 194 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 SFRP2Q96HF1 295 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 HMSDA8MTL9 139 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 M0R381 172 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 ZFP82Q8N141 532 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 Q8N3U1 123 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 TM2D2Q9BX73 214 aa15.17■□□□□ 0.02
CHD4-214ENST00000545942 A0A087WWL8 130 aa15.16■□□□□ 0.02
CHD4-214ENST00000545942 A0A0D9SG52 128 aa15.16■□□□□ 0.02
CHD4-214ENST00000545942 ZNF471Q9BX82 626 aaPredicted RBP15.16■□□□□ 0.02
CHD4-214ENST00000545942 TRAV8-3A0A0A6YYJ7 113 aa15.15■□□□□ 0.02
CHD4-214ENST00000545942 A0A1B0GV50 99 aa15.15■□□□□ 0.02
CHD4-214ENST00000545942 S100A9P06702 114 aaKnown RBP15.15■□□□□ 0.02
CHD4-214ENST00000545942 KANTRA0A1W2PQU2 76 aa15.14■□□□□ 0.01
CHD4-214ENST00000545942 BCL2L11O43521 198 aa15.14■□□□□ 0.01
CHD4-214ENST00000545942 TOR2AQ5JU69 321 aa15.14■□□□□ 0.01
CHD4-214ENST00000545942 DAZ4Q86SG3 579 aaKnown RBP15.14■□□□□ 0.01
CHD4-214ENST00000545942 DAZ3Q9NR90 486 aaKnown RBP15.14■□□□□ 0.01
CHD4-214ENST00000545942 SCO2A0A1W2PP80 73 aa15.13■□□□□ 0.01
CHD4-214ENST00000545942 PFDN1O60925 122 aa15.13■□□□□ 0.01
CHD4-214ENST00000545942 FRZBQ92765 325 aa15.13■□□□□ 0.01
CHD4-214ENST00000545942 EIF5AP63241 154 aaKnown RBP15.12■□□□□ 0.01
CHD4-214ENST00000545942 TRBV10-1A0A0K0K1A3 114 aa15.11■□□□□ 0.01
CHD4-214ENST00000545942 H2AFB1P0C5Y9 115 aa15.11■□□□□ 0.01
CHD4-214ENST00000545942 Q5VSD8 79 aa15.11■□□□□ 0.01
CHD4-214ENST00000545942 BAGE2Q86Y30 109 aa15.11■□□□□ 0.01
CHD4-214ENST00000545942 TMEM70Q9BUB7 260 aa15.11■□□□□ 0.01
CHD4-214ENST00000545942 URGCP-MRPS24S4R325 110 aa15.11■□□□□ 0.01
CHD4-214ENST00000545942 MLST8Q9BVC4 326 aa15.1■□□□□ 0.01
CHD4-214ENST00000545942 CXCL1P09341 107 aa15.09■□□□□ 0.01
CHD4-214ENST00000545942 RPL36AP83881 106 aaKnown RBP15.09■□□□□ 0.01
CHD4-214ENST00000545942 RPL19P84098 196 aaKnown RBP15.09■□□□□ 0.01
CHD4-214ENST00000545942 NIT1Q86X76 327 aa15.09■□□□□ 0.01
CHD4-214ENST00000545942 RPL36ALQ969Q0 106 aaKnown RBP15.09■□□□□ 0.01
CHD4-214ENST00000545942 FAT1Q14517 4588 aa15.09■□□□□ 0.01
CHD4-214ENST00000545942 COX11Q9Y6N1 276 aa15.08■□□□□ 0
CHD4-214ENST00000545942 TRBV7-3A0A075B6L6 115 aa15.07■□□□□ 0
CHD4-214ENST00000545942 SMR3BP02814 79 aaPredicted RBP15.07■□□□□ 0
CHD4-214ENST00000545942 INAFM2P0DMQ5 153 aa15.07■□□□□ 0
CHD4-214ENST00000545942 WFDC2Q14508 124 aa15.07■□□□□ 0
CHD4-214ENST00000545942 OR10AG1Q8NH19 301 aa15.07■□□□□ 0
CHD4-214ENST00000545942 UBE2D3P61077 147 aa15.06■□□□□ 0
CHD4-214ENST00000545942 UBE2D2P62837 147 aa15.06■□□□□ 0
CHD4-214ENST00000545942 HAMPP81172 84 aa15.06■□□□□ 0
CHD4-214ENST00000545942 TMUB2Q71RG4 321 aa15.06■□□□□ 0
CHD4-214ENST00000545942 RMI2Q96E14 147 aa15.06■□□□□ 0
CHD4-214ENST00000545942 RAB4BP61018 213 aa15.05■□□□□ -0
CHD4-214ENST00000545942 PRR27Q6MZM9 219 aa15.05■□□□□ -0
CHD4-214ENST00000545942 OR10G8Q8NGN5 311 aa15.05■□□□□ -0
CHD4-214ENST00000545942 CHCHD7Q9BUK0 85 aa15.05■□□□□ -0
CHD4-214ENST00000545942 A0A087WX48 190 aa15.04■□□□□ -0
CHD4-214ENST00000545942 LECT2O14960 151 aa15.04■□□□□ -0
CHD4-214ENST00000545942 SNAI2O43623 268 aa15.04■□□□□ -0
CHD4-214ENST00000545942 ZNF56Q15929 161 aa15.04■□□□□ -0
CHD4-214ENST00000545942 KCNIP4Q6PIL6 250 aa15.04■□□□□ -0
CHD4-214ENST00000545942 SSBP4Q9BWG4 385 aaPredicted RBP15.04■□□□□ -0
CHD4-214ENST00000545942 MANBALQ9NQG1 85 aa15.04■□□□□ -0
CHD4-214ENST00000545942 C1QBP02746 253 aa15.03■□□□□ -0
CHD4-214ENST00000545942 OR5AL1P0C617 328 aa15.03■□□□□ -0
CHD4-214ENST00000545942 RPL35P42766 123 aaKnown RBP15.03■□□□□ -0
CHD4-214ENST00000545942 SPANXN1Q5VSR9 72 aa15.03■□□□□ -0
CHD4-214ENST00000545942 KLK12Q9UKR0 248 aa15.03■□□□□ -0
CHD4-214ENST00000545942 FAM229AH3BQW9 127 aa15.02■□□□□ -0
CHD4-214ENST00000545942 ELOBQ15370 118 aa15.02■□□□□ -0
CHD4-214ENST00000545942 GNG13Q9P2W3 67 aa15.02■□□□□ -0
CHD4-214ENST00000545942 CCL20P78556 96 aa15.01□□□□□ -0.01
CHD4-214ENST00000545942 NEXN-AS1Q8NBZ9 246 aa15.01□□□□□ -0.01
CHD4-214ENST00000545942 BAALCQ8WXS3 180 aa15.01□□□□□ -0.01
CHD4-214ENST00000545942 C11orf52Q96A22 123 aa15.01□□□□□ -0.01
CHD4-214ENST00000545942 FAM30AQ9NZY2 134 aa15.01□□□□□ -0.01
CHD4-214ENST00000545942 IGKV2D-24A0A075B6R9 120 aa15□□□□□ -0.01
CHD4-214ENST00000545942 TRBV6-8A0A0A6YYG3 113 aa15□□□□□ -0.01
CHD4-214ENST00000545942 TRAV1-1A0A0B4J248 108 aa15□□□□□ -0.01
CHD4-214ENST00000545942 MUC21A0A0G2JKD1 596 aa15□□□□□ -0.01
CHD4-214ENST00000545942 MUC21A0A140T8X8 626 aa15□□□□□ -0.01
CHD4-214ENST00000545942 RAB5CP51148 216 aa15□□□□□ -0.01
CHD4-214ENST00000545942 UBE2WQ96B02 151 aa15□□□□□ -0.01
CHD4-214ENST00000545942 DNAJC30Q96LL9 226 aa15□□□□□ -0.01
CHD4-214ENST00000545942 DERL1Q9BUN8 251 aa15□□□□□ -0.01
CHD4-214ENST00000545942 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.99□□□□□ -0.01
CHD4-214ENST00000545942 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.99□□□□□ -0.01
CHD4-214ENST00000545942 F5H697 171 aa14.98□□□□□ -0.01
CHD4-214ENST00000545942 EIF5AL1Q6IS14 154 aaKnown RBP14.98□□□□□ -0.01
CHD4-214ENST00000545942 Q8N976 141 aa14.98□□□□□ -0.01
CHD4-214ENST00000545942 TMEM262E9PQX1 116 aa14.97□□□□□ -0.01
CHD4-214ENST00000545942 TEX46H3BTG2 121 aa14.97□□□□□ -0.01
CHD4-214ENST00000545942 SSTP61278 116 aa14.97□□□□□ -0.01
CHD4-214ENST00000545942 Q0VG73 95 aa14.97□□□□□ -0.01
CHD4-214ENST00000545942 SMIM17P0DL12 118 aa14.96□□□□□ -0.01
CHD4-214ENST00000545942 CENPWQ5EE01 88 aa14.96□□□□□ -0.01
CHD4-214ENST00000545942 ATRAIDQ6UW56 229 aa14.96□□□□□ -0.01
CHD4-214ENST00000545942 AP1S3Q96PC3 154 aa14.96□□□□□ -0.01
CHD4-214ENST00000545942 RBFOX3A6NFN3 312 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms