RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 A8MWL6 223 aa11.42□□□□□ -0.58
LIMS2-217ENST00000545738 F5H768 121 aa11.42□□□□□ -0.58
LIMS2-217ENST00000545738 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
LIMS2-217ENST00000545738 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
LIMS2-217ENST00000545738 VPS13DQ5THJ4 4388 aa11.42□□□□□ -0.58
LIMS2-217ENST00000545738 XKRY2A2RUG3 117 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 C5orf52A6NGY3 159 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 HIGD1CA8MV81 97 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 FOXA3P55318 350 aaPredicted RBP11.41□□□□□ -0.58
LIMS2-217ENST00000545738 COTL1Q14019 142 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 Q6ZSN1 163 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 ZFP82Q8N141 532 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 PGLYRP4Q96LB8 373 aa11.41□□□□□ -0.58
LIMS2-217ENST00000545738 A0A087WWL8 130 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 A0A1W2PPQ1 181 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 CRYGDP07320 174 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 PIK3CD-AS1Q5SR53 167 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 TMEM88Q6PEY1 159 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 OR4C5Q8NGB2 326 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 VSIG2Q96IQ7 327 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 KMT2AQ03164 3969 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 IGHV4-4A0A075B6R2 117 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 SMIM27A0A1W2PRY6 76 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 C1orf196B1AJZ1 125 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 NTF3P20783 257 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 PCP4P48539 62 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 SPANXN1Q5VSR9 72 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 NUP35Q8NFH5 326 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 C2orf88Q9BSF0 95 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 Q9UF83 564 aa11.4□□□□□ -0.58
LIMS2-217ENST00000545738 HYDINQ4G0P3 5121 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 TRAV26-1A0A087WT03 109 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 A0A0J9YY99 117 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 IGLL5B9A064 214 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 NDUFAF3Q9BU61 184 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 GFRA4Q9GZZ7 299 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 KIF25-AS1Q9Y6Z4 181 aa11.39□□□□□ -0.59
LIMS2-217ENST00000545738 ALMS1Q8TCU4 4167 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 F2Z2F3 143 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 C3orf84H3BNL1 204 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 LINC00315P59091 139 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 A8MWV9 139 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 FAM74A4Q5TZK3 123 aa11.38□□□□□ -0.59
LIMS2-217ENST00000545738 C14orf178Q8N769 122 aaPredicted RBP11.38□□□□□ -0.59
LIMS2-217ENST00000545738 FAM231BA6NCW3 169 aa11.37□□□□□ -0.59
LIMS2-217ENST00000545738 EVI2AP22794 236 aa11.37□□□□□ -0.59
LIMS2-217ENST00000545738 LOC100131303A0A0U1RQF7 123 aa11.36□□□□□ -0.59
LIMS2-217ENST00000545738 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
LIMS2-217ENST00000545738 GATA1P15976 413 aaPredicted RBP11.36□□□□□ -0.59
LIMS2-217ENST00000545738 CRYBA4P53673 196 aa11.36□□□□□ -0.59
LIMS2-217ENST00000545738 APLNQ9ULZ1 77 aa11.36□□□□□ -0.59
LIMS2-217ENST00000545738 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 C7orf77A4D0Y5 90 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 MT-ND4LP03901 98 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 FAM3BP58499 235 aaPredicted RBP11.35□□□□□ -0.59
LIMS2-217ENST00000545738 CACNG7P62955 275 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 TWIST1Q15672 202 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 SLC25A29Q8N8R3 303 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 ANAPC16Q96DE5 110 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 HHLA3Q9XRX5 114 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 A0A1B0GV90 55 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 WDR73Q6P4I2 378 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
LIMS2-217ENST00000545738 PPP1R2P9O14990 202 aa11.34□□□□□ -0.59
LIMS2-217ENST00000545738 P0DMU3 169 aa11.34□□□□□ -0.59
LIMS2-217ENST00000545738 FAM231AP0DMU4 169 aa11.34□□□□□ -0.59
LIMS2-217ENST00000545738 FAM231CP0DMU5 169 aa11.34□□□□□ -0.59
LIMS2-217ENST00000545738 SNRPEP62304 92 aaKnown RBP11.34□□□□□ -0.59
LIMS2-217ENST00000545738 AP1S3Q96PC3 154 aa11.34□□□□□ -0.59
LIMS2-217ENST00000545738 PRO0255Q9UI72 69 aa11.34□□□□□ -0.59
LIMS2-217ENST00000545738 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
LIMS2-217ENST00000545738 TCAPO15273 167 aa11.33□□□□□ -0.6
LIMS2-217ENST00000545738 KLK5Q9Y337 293 aaPredicted RBP11.32□□□□□ -0.6
LIMS2-217ENST00000545738 A0A096LPF7 62 aa11.32□□□□□ -0.6
LIMS2-217ENST00000545738 PAX4O43316 350 aa11.32□□□□□ -0.6
LIMS2-217ENST00000545738 MRPL54Q6P161 138 aaKnown RBP11.32□□□□□ -0.6
LIMS2-217ENST00000545738 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
LIMS2-217ENST00000545738 A0A1B0GXF2 115 aa11.31□□□□□ -0.6
LIMS2-217ENST00000545738 RHODO00212 210 aa11.31□□□□□ -0.6
LIMS2-217ENST00000545738 SMCO4Q9NRQ5 59 aa11.31□□□□□ -0.6
LIMS2-217ENST00000545738 TRBV6-4A0A1B0GX49 114 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 TSTD3H0UI37 97 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 K7EQD1 137 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 NUDT3O95989 172 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 RHEBQ15382 184 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 RPS10P5Q9NQ39 176 aa11.3□□□□□ -0.6
LIMS2-217ENST00000545738 A0A087WWC5 75 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 GAS8-AS1O95177 125 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 GYPEP15421 78 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 PKIAP61925 76 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 ZNF56Q15929 161 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 DPH3P1Q9H4G8 78 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 RYR2Q92736 4967 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 TRAV26-2A0A0B4J265 109 aa11.29□□□□□ -0.6
LIMS2-217ENST00000545738 H3BNG1 76 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms