RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 SMUG1Q53HV7 270 aa9.97□□□□□ -0.81
CLSTN3-216ENST00000545663 CLLU1Q5K131 121 aa9.97□□□□□ -0.81
CLSTN3-216ENST00000545663 PRNTQ86SH4 94 aa9.97□□□□□ -0.81
CLSTN3-216ENST00000545663 ZFAND2AQ8N6M9 145 aa9.97□□□□□ -0.81
CLSTN3-216ENST00000545663 TM2D2Q9BX73 214 aa9.97□□□□□ -0.81
CLSTN3-216ENST00000545663 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 TRAV21A0A0B4J279 112 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 COX8CQ7Z4L0 72 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 Q86TA4 180 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 Q8N3U1 123 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 Q8TAT8 98 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 PCNPQ8WW12 178 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 BIN3Q9NQY0 253 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 TP53TG3Q9ULZ0 132 aa9.96□□□□□ -0.82
CLSTN3-216ENST00000545663 LTAP01374 205 aa9.95□□□□□ -0.82
CLSTN3-216ENST00000545663 RNASE4P34096 147 aaKnown RBP9.95□□□□□ -0.82
CLSTN3-216ENST00000545663 TCL1AP56279 114 aa9.95□□□□□ -0.82
CLSTN3-216ENST00000545663 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
CLSTN3-216ENST00000545663 Q6AWC8 147 aa9.95□□□□□ -0.82
CLSTN3-216ENST00000545663 ZNF479Q96JC4 524 aa9.95□□□□□ -0.82
CLSTN3-216ENST00000545663 TRAV34A0A0B4J273 112 aa9.94□□□□□ -0.82
CLSTN3-216ENST00000545663 RPL35P42766 123 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-216ENST00000545663 TDRG1Q3Y452 100 aa9.94□□□□□ -0.82
CLSTN3-216ENST00000545663 BAGE2Q86Y30 109 aa9.94□□□□□ -0.82
CLSTN3-216ENST00000545663 TMEM183AQ8IXX5 376 aa9.94□□□□□ -0.82
CLSTN3-216ENST00000545663 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
CLSTN3-216ENST00000545663 RAB19A4D1S5 217 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 FABP5P3A8MUU1 101 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 RGS13O14921 159 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 PFN1P07737 140 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 GNG4P50150 75 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 FAM159AQ6UWV7 190 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 LINC00479Q96M42 142 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 FSIP2Q5CZC0 6907 aa9.93□□□□□ -0.82
CLSTN3-216ENST00000545663 GCGP01275 180 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 IFITM2Q01629 132 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 BTN1A1Q13410 526 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 ANXA2RQ3ZCQ2 193 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 FAM74A3Q4VXF1 159 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 Q6ZQT7 251 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 EIF4E3Q8N5X7 224 aaKnown RBP9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 SGK494Q96LW2 274 aa9.92□□□□□ -0.82
CLSTN3-216ENST00000545663 TRGV11A0A075B6L2 103 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 IGHV1OR15-1A0A075B7D0 117 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 C9JCJ5 164 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 ORM1P02763 201 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 FAM162BQ5T6X4 162 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 TVP23CQ96ET8 276 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 DPH3P1Q9H4G8 78 aa9.91□□□□□ -0.82
CLSTN3-216ENST00000545663 CENPWQ5EE01 88 aa9.9□□□□□ -0.82
CLSTN3-216ENST00000545663 OR10J3Q5JRS4 329 aa9.9□□□□□ -0.82
CLSTN3-216ENST00000545663 IBA57Q5T440 356 aaKnown RBP9.9□□□□□ -0.82
CLSTN3-216ENST00000545663 MLST8Q9BVC4 326 aa9.9□□□□□ -0.82
CLSTN3-216ENST00000545663 SDF2L1Q9HCN8 221 aa9.9□□□□□ -0.82
CLSTN3-216ENST00000545663 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 TIRAPP58753 221 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 LAGE3Q14657 143 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 UQCC3Q6UW78 93 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 Q8N976 141 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 NHLRC2Q8NBF2 726 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 PARLQ9H300 379 aa9.89□□□□□ -0.83
CLSTN3-216ENST00000545663 PANO1I0J062 215 aa9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 SRP19P09132 144 aaKnown RBP9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 ZNF674Q2M3X9 581 aa9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 PRR9Q5T870 116 aa9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 DNAJC30Q96LL9 226 aa9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 SMIM7Q9BQ49 75 aa9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 DERL1Q9BUN8 251 aa9.88□□□□□ -0.83
CLSTN3-216ENST00000545663 ZNF727A8MUV8 499 aa9.87□□□□□ -0.83
CLSTN3-216ENST00000545663 CEBPGP53567 150 aa9.87□□□□□ -0.83
CLSTN3-216ENST00000545663 ZC2HC1AQ96GY0 325 aa9.87□□□□□ -0.83
CLSTN3-216ENST00000545663 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.87□□□□□ -0.83
CLSTN3-216ENST00000545663 XKRY2A2RUG3 117 aa9.86□□□□□ -0.83
CLSTN3-216ENST00000545663 MGST1P10620 155 aaKnown RBP9.86□□□□□ -0.83
CLSTN3-216ENST00000545663 SPXQ9BT56 116 aa9.86□□□□□ -0.83
CLSTN3-216ENST00000545663 NAGKQ9UJ70 344 aa9.86□□□□□ -0.83
CLSTN3-216ENST00000545663 TRAV8-3A0A0A6YYJ7 113 aa9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 SH2D1AO60880 128 aa9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 CXCL1P09341 107 aa9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 ZNF80P51504 273 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 KRTAP10-8P60410 259 aa9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 RPS20P60866 119 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 MUC21Q5SSG8 566 aa9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 DAZ4Q86SG3 579 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 DAZ3Q9NR90 486 aaKnown RBP9.85□□□□□ -0.83
CLSTN3-216ENST00000545663 B4DEV8 164 aa9.84□□□□□ -0.83
CLSTN3-216ENST00000545663 TMEM241Q24JQ0 296 aa9.84□□□□□ -0.83
CLSTN3-216ENST00000545663 LINC01559Q495D7 138 aa9.84□□□□□ -0.83
CLSTN3-216ENST00000545663 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 IGHV3-16A0A0C4DH30 117 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 LINC00862A6NCI5 91 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 P01737 135 aa9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 S100A4P26447 101 aaKnown RBP9.83□□□□□ -0.84
CLSTN3-216ENST00000545663 CRIP1P50238 77 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms