RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 A0A1B0GV50 99 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 BCL2L11O43521 198 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 SEC11BP0C7V7 166 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 GCSHP23434 173 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 FAM74A4Q5TZK3 123 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 Q8N814 137 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 FAM213BQ8TBF2 198 aa14.08□□□□□ -0.16
SCARB1-210ENST00000545493 IGLV5-52A0A0A0MRZ9 124 aa14.07□□□□□ -0.16
SCARB1-210ENST00000545493 SCO2A0A1W2PP80 73 aa14.07□□□□□ -0.16
SCARB1-210ENST00000545493 EPM2AB3EWF7 344 aa14.07□□□□□ -0.16
SCARB1-210ENST00000545493 MBD3L1Q8WWY6 194 aa14.07□□□□□ -0.16
SCARB1-210ENST00000545493 SFRP2Q96HF1 295 aa14.07□□□□□ -0.16
SCARB1-210ENST00000545493 PHLDA3Q9Y5J5 127 aa14.07□□□□□ -0.16
SCARB1-210ENST00000545493 A0A087WWL8 130 aa14.06□□□□□ -0.16
SCARB1-210ENST00000545493 HMSDA8MTL9 139 aa14.06□□□□□ -0.16
SCARB1-210ENST00000545493 M0R381 172 aa14.06□□□□□ -0.16
SCARB1-210ENST00000545493 WFDC2Q14508 124 aa14.06□□□□□ -0.16
SCARB1-210ENST00000545493 NTN5Q8WTR8 489 aaPredicted RBP14.06□□□□□ -0.16
SCARB1-210ENST00000545493 SFT2D1Q8WV19 159 aa14.06□□□□□ -0.16
SCARB1-210ENST00000545493 ZNF471Q9BX82 626 aaPredicted RBP14.06□□□□□ -0.16
SCARB1-210ENST00000545493 UMAD1C9J7I0 102 aa14.05□□□□□ -0.16
SCARB1-210ENST00000545493 TPT1P13693 172 aaKnown RBP14.05□□□□□ -0.16
SCARB1-210ENST00000545493 HAMPP81172 84 aa14.05□□□□□ -0.16
SCARB1-210ENST00000545493 ZFP82Q8N141 532 aa14.05□□□□□ -0.16
SCARB1-210ENST00000545493 RPL19P84098 196 aaKnown RBP14.04□□□□□ -0.16
SCARB1-210ENST00000545493 Q5VSD8 79 aa14.04□□□□□ -0.16
SCARB1-210ENST00000545493 DAZ4Q86SG3 579 aaKnown RBP14.04□□□□□ -0.16
SCARB1-210ENST00000545493 DAZ3Q9NR90 486 aaKnown RBP14.04□□□□□ -0.16
SCARB1-210ENST00000545493 KANTRA0A1W2PQU2 76 aa14.03□□□□□ -0.16
SCARB1-210ENST00000545493 MLST8Q9BVC4 326 aa14.03□□□□□ -0.16
SCARB1-210ENST00000545493 A0A087WWC5 75 aa14.02□□□□□ -0.17
SCARB1-210ENST00000545493 A0A0D9SG52 128 aa14.02□□□□□ -0.17
SCARB1-210ENST00000545493 PFDN1O60925 122 aa14.01□□□□□ -0.17
SCARB1-210ENST00000545493 S100A9P06702 114 aaKnown RBP14□□□□□ -0.17
SCARB1-210ENST00000545493 CXCL1P09341 107 aa14□□□□□ -0.17
SCARB1-210ENST00000545493 OR10AG1Q8NH19 301 aa14□□□□□ -0.17
SCARB1-210ENST00000545493 TM2D2Q9BX73 214 aa14□□□□□ -0.17
SCARB1-210ENST00000545493 TRAV8-3A0A0A6YYJ7 113 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 TRBV10-1A0A0K0K1A3 114 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 UBE2D3P61077 147 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 UBE2D2P62837 147 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 NIT1Q86X76 327 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 DNAJC30Q96LL9 226 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 TMEM70Q9BUB7 260 aa13.99□□□□□ -0.17
SCARB1-210ENST00000545493 SNAI2O43623 268 aa13.98□□□□□ -0.17
SCARB1-210ENST00000545493 SMR3BP02814 79 aaPredicted RBP13.98□□□□□ -0.17
SCARB1-210ENST00000545493 H2AFB1P0C5Y9 115 aa13.98□□□□□ -0.17
SCARB1-210ENST00000545493 TMUB2Q71RG4 321 aa13.98□□□□□ -0.17
SCARB1-210ENST00000545493 BAGE2Q86Y30 109 aa13.98□□□□□ -0.17
SCARB1-210ENST00000545493 FRZBQ92765 325 aa13.98□□□□□ -0.17
SCARB1-210ENST00000545493 LECT2O14960 151 aa13.97□□□□□ -0.17
SCARB1-210ENST00000545493 TOR2AQ5JU69 321 aa13.97□□□□□ -0.17
SCARB1-210ENST00000545493 PRR27Q6MZM9 219 aa13.97□□□□□ -0.17
SCARB1-210ENST00000545493 OR10G8Q8NGN5 311 aa13.97□□□□□ -0.17
SCARB1-210ENST00000545493 EIF5AP63241 154 aaKnown RBP13.96□□□□□ -0.17
SCARB1-210ENST00000545493 RPL36AP83881 106 aaKnown RBP13.96□□□□□ -0.17
SCARB1-210ENST00000545493 RPL36ALQ969Q0 106 aaKnown RBP13.96□□□□□ -0.17
SCARB1-210ENST00000545493 DERL1Q9BUN8 251 aa13.96□□□□□ -0.17
SCARB1-210ENST00000545493 FAM30AQ9NZY2 134 aa13.96□□□□□ -0.17
SCARB1-210ENST00000545493 TRBV7-3A0A075B6L6 115 aa13.95□□□□□ -0.18
SCARB1-210ENST00000545493 RPL35P42766 123 aaKnown RBP13.95□□□□□ -0.18
SCARB1-210ENST00000545493 CCL20P78556 96 aa13.95□□□□□ -0.18
SCARB1-210ENST00000545493 ZNF56Q15929 161 aa13.95□□□□□ -0.18
SCARB1-210ENST00000545493 C11orf52Q96A22 123 aa13.95□□□□□ -0.18
SCARB1-210ENST00000545493 SSBP4Q9BWG4 385 aaPredicted RBP13.95□□□□□ -0.18
SCARB1-210ENST00000545493 MUC21A0A0G2JKD1 596 aa13.94□□□□□ -0.18
SCARB1-210ENST00000545493 MUC21A0A140T8X8 626 aa13.94□□□□□ -0.18
SCARB1-210ENST00000545493 OR5AL1P0C617 328 aa13.94□□□□□ -0.18
SCARB1-210ENST00000545493 INAFM2P0DMQ5 153 aa13.94□□□□□ -0.18
SCARB1-210ENST00000545493 NEXN-AS1Q8NBZ9 246 aa13.94□□□□□ -0.18
SCARB1-210ENST00000545493 SRRM2Q9UQ35 2752 aaKnown RBP13.94□□□□□ -0.18
SCARB1-210ENST00000545493 URGCP-MRPS24S4R325 110 aa13.94□□□□□ -0.18
SCARB1-210ENST00000545493 RAB4BP61018 213 aa13.93□□□□□ -0.18
SCARB1-210ENST00000545493 CHCHD7Q9BUK0 85 aa13.93□□□□□ -0.18
SCARB1-210ENST00000545493 MANBALQ9NQG1 85 aa13.93□□□□□ -0.18
SCARB1-210ENST00000545493 GNG13Q9P2W3 67 aa13.93□□□□□ -0.18
SCARB1-210ENST00000545493 KLK12Q9UKR0 248 aa13.93□□□□□ -0.18
SCARB1-210ENST00000545493 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.92□□□□□ -0.18
SCARB1-210ENST00000545493 BAALCQ8WXS3 180 aa13.92□□□□□ -0.18
SCARB1-210ENST00000545493 CENPWQ5EE01 88 aa13.91□□□□□ -0.18
SCARB1-210ENST00000545493 SPANXN1Q5VSR9 72 aa13.91□□□□□ -0.18
SCARB1-210ENST00000545493 Q6ZSA8 131 aa13.91□□□□□ -0.18
SCARB1-210ENST00000545493 COX11Q9Y6N1 276 aa13.91□□□□□ -0.18
SCARB1-210ENST00000545493 IGKV2D-24A0A075B6R9 120 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 A0A087WX48 190 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 TRAV1-1A0A0B4J248 108 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 IGLV2-8P01709 118 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 C1QBP02746 253 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 UBE2WQ96B02 151 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 RMI2Q96E14 147 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 KIF25-AS1Q9Y6Z4 181 aa13.9□□□□□ -0.18
SCARB1-210ENST00000545493 TRBV6-8A0A0A6YYG3 113 aa13.89□□□□□ -0.19
SCARB1-210ENST00000545493 ATRAIDQ6UW56 229 aa13.89□□□□□ -0.19
SCARB1-210ENST00000545493 FAT3Q8TDW7 4589 aa13.88□□□□□ -0.19
SCARB1-210ENST00000545493 AP1S3Q96PC3 154 aa13.88□□□□□ -0.19
SCARB1-210ENST00000545493 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
SCARB1-210ENST00000545493 IGLC6P0CF74 106 aa13.87□□□□□ -0.19
SCARB1-210ENST00000545493 GZMBP10144 247 aa13.87□□□□□ -0.19
SCARB1-210ENST00000545493 RAB5CP51148 216 aa13.87□□□□□ -0.19
SCARB1-210ENST00000545493 SSTP61278 116 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms