RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 RPL39LQ96EH5 51 aaKnown RBP4.43□□□□□ -1.7
VPS50-220ENST00000544910 TRBV12-3P01733 135 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 BAALC-AS2P0C853 105 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 SUMO4Q6EEV6 95 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 PIFOQ8TCI5 191 aa4.43□□□□□ -1.7
VPS50-220ENST00000544910 HCFC1P51610 2035 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 RHOHQ15669 191 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 Q6ZUT4 128 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 DIDO1Q9BTC0 2240 aaKnown RBP4.42□□□□□ -1.7
VPS50-220ENST00000544910 TRBV10-2A0A0K0K1G8 114 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 MRPS12O15235 138 aaKnown RBP4.42□□□□□ -1.7
VPS50-220ENST00000544910 BLCAPP62952 87 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 UNQ9165/PRO28630Q6UXU0 137 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 RNF183Q96D59 192 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 Q96MF0 132 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 INTS1Q8N201 2190 aaKnown RBP4.42□□□□□ -1.7
VPS50-220ENST00000544910 K7EMT4 169 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 NDUFV3P56181 108 aaKnown RBP4.42□□□□□ -1.7
VPS50-220ENST00000544910 HAMPP81172 84 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 DSCR8Q96T75 97 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 CEP350Q5VT06 3117 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 SPRY2O43597 315 aa4.42□□□□□ -1.7
VPS50-220ENST00000544910 A0A1B0GX51 115 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 TMEM89A2RUT3 159 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 HERVK_113P63121 156 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 C20orf173Q96LM9 149 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 F8WEM9 126 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 HOXD3P31249 432 aaPredicted RBP4.41□□□□□ -1.7
VPS50-220ENST00000544910 ODF1Q14990 250 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 SS18Q15532 418 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 RNF185Q96GF1 192 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 COL27A1Q8IZC6 1860 aaPredicted RBP4.41□□□□□ -1.7
VPS50-220ENST00000544910 TRGV1A0A0A0MS02 117 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 IGF1P05019 195 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 CDSNQ15517 529 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 TANC2Q9HCD6 1990 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 H0YGX0 51 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 H3BQ85 93 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 UQCRQO14949 82 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 NSUN5P1Q3KNT7 163 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 C11orf44Q8N8P7 122 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 ORMDL1Q9P0S3 153 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 ICOSQ9Y6W8 199 aa4.41□□□□□ -1.7
VPS50-220ENST00000544910 LINC00643Q86TS7 51 aa4.4□□□□□ -1.7
VPS50-220ENST00000544910 GPHB5Q86YW7 130 aa4.4□□□□□ -1.7
VPS50-220ENST00000544910 BAALCQ8WXS3 180 aa4.4□□□□□ -1.7
VPS50-220ENST00000544910 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.7
VPS50-220ENST00000544910 ZFP2Q6ZN57 461 aa4.4□□□□□ -1.7
VPS50-220ENST00000544910 E9PLD3 99 aa4.4□□□□□ -1.71
VPS50-220ENST00000544910 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
VPS50-220ENST00000544910 BRCA2P51587 3418 aa4.4□□□□□ -1.71
VPS50-220ENST00000544910 CRLF1O75462 422 aa4.4□□□□□ -1.71
VPS50-220ENST00000544910 GTF3C1Q12789 2109 aa4.4□□□□□ -1.71
VPS50-220ENST00000544910 IGHV4OR15-8A0A075B7B6 117 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 A0A087WW49 117 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 hADV29S1A0JD25 119 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 CLPSL1A2RUU4 121 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 DEFB1P60022 68 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 UBE2E2Q96LR5 201 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 A4D1N5 150 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 IGHV3-53P01767 116 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 SLURP1P55000 103 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 PCNX2A6NKB5 2137 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 PSMB8P28062 276 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 SPATA25Q9BR10 227 aa4.39□□□□□ -1.71
VPS50-220ENST00000544910 CDK2AP2O75956 126 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 RPL35AP18077 110 aaKnown RBP4.38□□□□□ -1.71
VPS50-220ENST00000544910 DEFB113Q30KQ7 82 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 NRGNQ92686 78 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 TM2D2Q9BX73 214 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 F8W735 103 aaPredicted RBP4.38□□□□□ -1.71
VPS50-220ENST00000544910 ODF3Q96PU9 254 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 IGHV3-16A0A0C4DH30 117 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 MUSTN1Q8IVN3 82 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 XCL2Q9UBD3 114 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 TINCRA0A1B0GVN0 87 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 MT-ATP8P03928 68 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 DEFB136Q30KP8 78 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 Q8N1Y9 231 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 RNF152Q8N8N0 203 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 C4orf3Q8WVX3 66 aa4.38□□□□□ -1.71
VPS50-220ENST00000544910 C3orf22Q8N5N4 141 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 PTPRBP23467 1997 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 TET2Q6N021 2002 aaPredicted RBP4.37□□□□□ -1.71
VPS50-220ENST00000544910 C11orf86A6NJI1 115 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 PRR14LQ5THK1 2151 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 COX8CQ7Z4L0 72 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 NDUFA11Q86Y39 141 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 DPH3Q96FX2 82 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 IGHV3-38A0A0C4DH36 116 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 A0A0J9YX75 114 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 CNFNQ9BYD5 112 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 TTTY13Q9BZ97 58 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 GPR179Q6PRD1 2367 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 IMUPQ9GZP8 106 aa4.37□□□□□ -1.71
VPS50-220ENST00000544910 LGALS9O00182 355 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms