RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 Q5PR19 223 aa9.26□□□□□ -0.93
PAAF1-215ENST00000544909 USP9XQ93008 2570 aaPredicted RBP9.26□□□□□ -0.93
PAAF1-215ENST00000544909 SPG11Q96JI7 2443 aa9.26□□□□□ -0.93
PAAF1-215ENST00000544909 TRBV7-3A0A075B6L6 115 aa9.26□□□□□ -0.93
PAAF1-215ENST00000544909 HOXD3P31249 432 aaPredicted RBP9.26□□□□□ -0.93
PAAF1-215ENST00000544909 MUC4Q99102 2169 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 C11orf86A6NJI1 115 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 M0QY20 66 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 CRYBA4P53673 196 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 AMTNQ6UX39 209 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 TMEM86BQ8N661 226 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 SPAG8Q99932 426 aaPredicted RBP9.25□□□□□ -0.93
PAAF1-215ENST00000544909 TP53TG1Q9Y2A0 90 aa9.25□□□□□ -0.93
PAAF1-215ENST00000544909 PRRC2AP48634 2157 aaKnown RBP9.24□□□□□ -0.93
PAAF1-215ENST00000544909 IGHV4-31P0DP07 118 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 SYNJ2BPP57105 145 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 Q8N1Y9 231 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 HIST1H4GQ99525 98 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 LINC00467Q9BRT7 94 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 PEMTQ9UBM1 199 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 CRYGDP07320 174 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 SRD5A1P18405 259 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 ZNF876PQ49A33 203 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 NEGR1Q7Z3B1 354 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 NFE4Q86UQ8 179 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 MAPKAPK5-AS1Q8N8E1 139 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 CLUHP3Q96NS8 147 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 PRADC1Q9BSG0 188 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 TTTY13Q9BZ97 58 aa9.24□□□□□ -0.93
PAAF1-215ENST00000544909 CSPG4Q6UVK1 2322 aa9.23□□□□□ -0.93
PAAF1-215ENST00000544909 COL12A1Q99715 3063 aa9.23□□□□□ -0.93
PAAF1-215ENST00000544909 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
PAAF1-215ENST00000544909 TCTAP57738 103 aa9.23□□□□□ -0.93
PAAF1-215ENST00000544909 NHP2Q9NX24 153 aaKnown RBP9.23□□□□□ -0.93
PAAF1-215ENST00000544909 ACACBO00763 2458 aa9.22□□□□□ -0.93
PAAF1-215ENST00000544909 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
PAAF1-215ENST00000544909 F5H697 171 aa9.22□□□□□ -0.93
PAAF1-215ENST00000544909 C4orf3Q8WVX3 66 aa9.22□□□□□ -0.93
PAAF1-215ENST00000544909 SPANXB1Q9NS25 103 aaPredicted RBP9.22□□□□□ -0.93
PAAF1-215ENST00000544909 IGSF10Q6WRI0 2623 aa9.22□□□□□ -0.93
PAAF1-215ENST00000544909 TSHBP01222 138 aa9.21□□□□□ -0.93
PAAF1-215ENST00000544909 EDN2P20800 178 aa9.21□□□□□ -0.93
PAAF1-215ENST00000544909 SCGB2A2Q13296 93 aa9.21□□□□□ -0.93
PAAF1-215ENST00000544909 C12orf74Q32Q52 190 aa9.21□□□□□ -0.93
PAAF1-215ENST00000544909 RAB37Q96AX2 223 aa9.21□□□□□ -0.93
PAAF1-215ENST00000544909 A8MWV9 139 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 IGLL5B9A064 214 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 F8W1H4 67 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 I3L3M4 83 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 ZNF56Q15929 161 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 DEFB113Q30KQ7 82 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 TCTEX1D4Q5JR98 221 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 ZNF479Q96JC4 524 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 MDFICQ9P1T7 246 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 PYGO1Q9Y3Y4 419 aa9.21□□□□□ -0.94
PAAF1-215ENST00000544909 A0A087WWL8 130 aa9.2□□□□□ -0.94
PAAF1-215ENST00000544909 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
PAAF1-215ENST00000544909 SPINK13Q1W4C9 94 aa9.2□□□□□ -0.94
PAAF1-215ENST00000544909 C10orf99Q6UWK7 81 aa9.2□□□□□ -0.94
PAAF1-215ENST00000544909 HOXA3O43365 443 aaPredicted RBP9.19□□□□□ -0.94
PAAF1-215ENST00000544909 RRN3P1Q2M238 152 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 LYRM7Q5U5X0 104 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 C20orf203Q8NBC4 194 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 RHODO00212 210 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 SPRY2O43597 315 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 SCGB1D4Q6XE38 83 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 NRGNQ92686 78 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 JPT2Q9H910 190 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 FLNCQ14315 2725 aa9.19□□□□□ -0.94
PAAF1-215ENST00000544909 MYO18BQ8IUG5 2567 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 TRAV25A0A0B4J276 109 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 H3BMM0 161 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 PCP4P48539 62 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 UBE2D1P51668 147 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
PAAF1-215ENST00000544909 MORN3Q6PF18 240 aaPredicted RBP9.18□□□□□ -0.94
PAAF1-215ENST00000544909 DLX4Q92988 240 aaPredicted RBP9.18□□□□□ -0.94
PAAF1-215ENST00000544909 G3V4G9 280 aa9.17□□□□□ -0.94
PAAF1-215ENST00000544909 M0R2P5 195 aa9.17□□□□□ -0.94
PAAF1-215ENST00000544909 ZNF415Q09FC8 603 aa9.17□□□□□ -0.94
PAAF1-215ENST00000544909 VPS25Q9BRG1 176 aa9.17□□□□□ -0.94
PAAF1-215ENST00000544909 SPXQ9BT56 116 aa9.17□□□□□ -0.94
PAAF1-215ENST00000544909 CREBBPQ92793 2442 aa9.17□□□□□ -0.94
PAAF1-215ENST00000544909 ANKRD17O75179 2603 aaKnown RBP9.17□□□□□ -0.94
PAAF1-215ENST00000544909 USP9YO00507 2555 aaPredicted RBP9.17□□□□□ -0.94
PAAF1-215ENST00000544909 A0A0J9YY99 117 aa9.16□□□□□ -0.94
PAAF1-215ENST00000544909 J3QR89 54 aa9.16□□□□□ -0.94
PAAF1-215ENST00000544909 K7ERJ3 54 aa9.16□□□□□ -0.94
PAAF1-215ENST00000544909 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
PAAF1-215ENST00000544909 SLC25A29Q8N8R3 303 aa9.16□□□□□ -0.94
PAAF1-215ENST00000544909 DNAJC30Q96LL9 226 aa9.16□□□□□ -0.94
PAAF1-215ENST00000544909 DUX5Q96PT3 197 aa9.16□□□□□ -0.94
PAAF1-215ENST00000544909 PLEKHB2Q96CS7 222 aa9.15□□□□□ -0.94
PAAF1-215ENST00000544909 J3QQQ9 107 aa9.15□□□□□ -0.95
PAAF1-215ENST00000544909 LEPROTO15243 131 aa9.15□□□□□ -0.95
PAAF1-215ENST00000544909 DEFB131AP59861 70 aa9.15□□□□□ -0.95
PAAF1-215ENST00000544909 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.95
PAAF1-215ENST00000544909 CD300EQ496F6 205 aaPredicted RBP9.15□□□□□ -0.95
PAAF1-215ENST00000544909 SPANXA1Q9NS26 97 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms