RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 NFE4Q86UQ8 179 aa9.7□□□□□ -0.86
CPSF7-223ENST00000544669 Q8N1Y9 231 aa9.7□□□□□ -0.86
CPSF7-223ENST00000544669 HIVEP3Q5T1R4 2406 aa9.69□□□□□ -0.86
CPSF7-223ENST00000544669 CRYGDP07320 174 aa9.69□□□□□ -0.86
CPSF7-223ENST00000544669 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
CPSF7-223ENST00000544669 LRRC75A-AS1Q8N1F1 130 aa9.69□□□□□ -0.86
CPSF7-223ENST00000544669 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
CPSF7-223ENST00000544669 A0A087WWL8 130 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 A8MWV9 139 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 FSHBP01225 129 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 HOXD3P31249 432 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-223ENST00000544669 Q5PR19 223 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 NAA38Q9BRA0 125 aaKnown RBP9.68□□□□□ -0.86
CPSF7-223ENST00000544669 MDFICQ9P1T7 246 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 IGF2RP11717 2491 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 IGLV4-69A0A075B6H9 119 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
CPSF7-223ENST00000544669 CACNA1BQ00975 2339 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 A0A096LNT2 108 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 A8MTW9 85 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 K7ERJ3 54 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 LGALS3P17931 250 aaKnown RBP9.67□□□□□ -0.86
CPSF7-223ENST00000544669 CD300EQ496F6 205 aaPredicted RBP9.67□□□□□ -0.86
CPSF7-223ENST00000544669 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 WFDC12Q8WWY7 111 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 COL6A6A6NMZ7 2263 aa9.67□□□□□ -0.86
CPSF7-223ENST00000544669 SPRY2O43597 315 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 TSHBP01222 138 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 RPL24P83731 157 aaKnown RBP9.66□□□□□ -0.86
CPSF7-223ENST00000544669 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 TMEM170BQ5T4T1 132 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 Q8N2B8 174 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 C20orf203Q8NBC4 194 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 ZNF702PQ9H963 129 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 SPTBN1Q01082 2364 aaKnown RBP9.66□□□□□ -0.86
CPSF7-223ENST00000544669 HRNRQ86YZ3 2850 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-223ENST00000544669 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 UBE2D1P51668 147 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 SLC25A29Q8N8R3 303 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 SPAG8Q99932 426 aaPredicted RBP9.66□□□□□ -0.86
CPSF7-223ENST00000544669 VCX2Q9H322 139 aa9.66□□□□□ -0.86
CPSF7-223ENST00000544669 MRPL16Q9NX20 251 aaKnown RBP9.66□□□□□ -0.86
CPSF7-223ENST00000544669 RHODO00212 210 aa9.65□□□□□ -0.86
CPSF7-223ENST00000544669 LEPROTO15243 131 aa9.65□□□□□ -0.86
CPSF7-223ENST00000544669 TMEM86BQ8N661 226 aa9.65□□□□□ -0.86
CPSF7-223ENST00000544669 DLX4Q92988 240 aaPredicted RBP9.65□□□□□ -0.86
CPSF7-223ENST00000544669 CLUHP3Q96NS8 147 aa9.65□□□□□ -0.86
CPSF7-223ENST00000544669 DUX5Q96PT3 197 aa9.65□□□□□ -0.86
CPSF7-223ENST00000544669 JPT2Q9H910 190 aa9.65□□□□□ -0.86
CPSF7-223ENST00000544669 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 A0A0J9YY99 117 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 J3QQQ9 107 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 DNAJC30Q96LL9 226 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 SPXQ9BT56 116 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 NBASA2RRP1 2371 aa9.64□□□□□ -0.87
CPSF7-223ENST00000544669 M0R2P5 195 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 SAP30O75446 220 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 IGKV3-20P01619 116 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 TNFRSF18Q9Y5U5 241 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 LRBAP50851 2863 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 ATP6V0E2Q8NHE4 81 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 RAX2Q96IS3 184 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 PGPEP1Q9NXJ5 209 aa9.63□□□□□ -0.87
CPSF7-223ENST00000544669 MED13LQ71F56 2210 aa9.62□□□□□ -0.87
CPSF7-223ENST00000544669 IGHV4-31P0DP07 118 aa9.62□□□□□ -0.87
CPSF7-223ENST00000544669 EDN2P20800 178 aa9.62□□□□□ -0.87
CPSF7-223ENST00000544669 ATRXP46100 2492 aa9.62□□□□□ -0.87
CPSF7-223ENST00000544669 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
CPSF7-223ENST00000544669 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-223ENST00000544669 TRAV25A0A0B4J276 109 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 H3BMM0 161 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 SCGB1A1P11684 91 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 H3BMG7 143 aa9.61□□□□□ -0.87
CPSF7-223ENST00000544669 MORN3Q6PF18 240 aaPredicted RBP9.61□□□□□ -0.87
CPSF7-223ENST00000544669 IGHV3-30P01768 117 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 IGHV3-30-5P0DP03 117 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 CMC4P56277 68 aaPredicted RBP9.6□□□□□ -0.87
CPSF7-223ENST00000544669 DEFB131AP59861 70 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 SMAGPQ0VAQ4 97 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 C10orf99Q6UWK7 81 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 NDUFA11Q86Y39 141 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 KLHL30-AS1Q8NEE0 82 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 ZNRF2Q8NHG8 242 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 DYNLRB2Q8TF09 96 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 DUX3Q96PT4 197 aa9.6□□□□□ -0.87
CPSF7-223ENST00000544669 TEX48A0A1B0GUV7 120 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 P0DMU3 169 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 FAM231AP0DMU4 169 aa9.59□□□□□ -0.87
CPSF7-223ENST00000544669 FAM231CP0DMU5 169 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms