RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 ANAPC16Q96DE5 110 aa12.73□□□□□ -0.37
TMED3-204ENST00000543455 NUDT11Q96G61 164 aa12.73□□□□□ -0.37
TMED3-204ENST00000543455 KCNS1Q96KK3 526 aa12.73□□□□□ -0.37
TMED3-204ENST00000543455 RPS10P5Q9NQ39 176 aa12.73□□□□□ -0.37
TMED3-204ENST00000543455 DNAH5Q8TE73 4624 aa12.73□□□□□ -0.37
TMED3-204ENST00000543455 FABP5P3A8MUU1 101 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 K7EQD1 137 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 PPP1R2P9O14990 202 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 SH2D1AO60880 128 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 PFN1P07737 140 aaKnown RBP12.72□□□□□ -0.37
TMED3-204ENST00000543455 MRPL23Q16540 153 aaKnown RBP12.72□□□□□ -0.37
TMED3-204ENST00000543455 LYPD5Q6UWN5 251 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 C15orf54Q8N8G6 183 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 DAZAP1Q96EP5 407 aaKnown RBP12.72□□□□□ -0.37
TMED3-204ENST00000543455 CTDSP1Q9GZU7 261 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 HSPG2P98160 4391 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 NXPH4O95158 308 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 KRTAP17-1Q9BYP8 105 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 TMEM242Q9NWH2 141 aa12.72□□□□□ -0.37
TMED3-204ENST00000543455 LOC100131303A0A0U1RQF7 123 aa12.71□□□□□ -0.38
TMED3-204ENST00000543455 P01737 135 aa12.71□□□□□ -0.38
TMED3-204ENST00000543455 MED14OSP0DP75 135 aa12.71□□□□□ -0.38
TMED3-204ENST00000543455 OR4C5Q8NGB2 326 aa12.71□□□□□ -0.38
TMED3-204ENST00000543455 V9GYV3 84 aa12.71□□□□□ -0.38
TMED3-204ENST00000543455 PCLOQ9Y6V0 5065 aa12.7□□□□□ -0.38
TMED3-204ENST00000543455 SIVA1O15304 175 aa12.7□□□□□ -0.38
TMED3-204ENST00000543455 GATCO43716 136 aaKnown RBP12.7□□□□□ -0.38
TMED3-204ENST00000543455 RNASE3P12724 160 aaKnown RBP12.7□□□□□ -0.38
TMED3-204ENST00000543455 GYPEP15421 78 aa12.7□□□□□ -0.38
TMED3-204ENST00000543455 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
TMED3-204ENST00000543455 IGKV3D-20A0A0C4DH25 116 aa12.69□□□□□ -0.38
TMED3-204ENST00000543455 GATA1P15976 413 aaPredicted RBP12.69□□□□□ -0.38
TMED3-204ENST00000543455 Q6ZRN7 208 aaPredicted RBP12.69□□□□□ -0.38
TMED3-204ENST00000543455 RPP21Q9H633 154 aaKnown RBP12.69□□□□□ -0.38
TMED3-204ENST00000543455 LINC00315P59091 139 aa12.68□□□□□ -0.38
TMED3-204ENST00000543455 CT83Q5H943 113 aa12.68□□□□□ -0.38
TMED3-204ENST00000543455 RS1O15537 224 aa12.67□□□□□ -0.38
TMED3-204ENST00000543455 SRIP30626 198 aa12.67□□□□□ -0.38
TMED3-204ENST00000543455 ZNF876PQ49A33 203 aa12.67□□□□□ -0.38
TMED3-204ENST00000543455 CFAP126Q5VTH2 177 aa12.67□□□□□ -0.38
TMED3-204ENST00000543455 APOBP04114 4563 aaKnown RBP12.67□□□□□ -0.38
TMED3-204ENST00000543455 SCO1O75880 301 aa12.66□□□□□ -0.38
TMED3-204ENST00000543455 ORM1P02763 201 aa12.66□□□□□ -0.38
TMED3-204ENST00000543455 LINC01559Q495D7 138 aa12.66□□□□□ -0.38
TMED3-204ENST00000543455 OR2D3Q8NGH3 330 aa12.66□□□□□ -0.38
TMED3-204ENST00000543455 BTF3P20290 206 aaKnown RBP12.65□□□□□ -0.38
TMED3-204ENST00000543455 WFDC10BQ8IUB3 73 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 PTH2Q96A98 100 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 IMMP2LQ96T52 175 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 SMCO4Q9NRQ5 59 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 TNFRSF18Q9Y5U5 241 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 A8MWL6 223 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 RPL19P84098 196 aaKnown RBP12.65□□□□□ -0.38
TMED3-204ENST00000543455 IL36BQ9NZH7 164 aa12.65□□□□□ -0.38
TMED3-204ENST00000543455 RPS20P60866 119 aaKnown RBP12.64□□□□□ -0.39
TMED3-204ENST00000543455 CBLN2Q8IUK8 224 aa12.64□□□□□ -0.39
TMED3-204ENST00000543455 SLC25A29Q8N8R3 303 aa12.64□□□□□ -0.39
TMED3-204ENST00000543455 TSKUQ8WUA8 353 aa12.64□□□□□ -0.39
TMED3-204ENST00000543455 IGHV3-73A0A0B4J1V6 119 aa12.63□□□□□ -0.39
TMED3-204ENST00000543455 SMIM27A0A1W2PRY6 76 aa12.63□□□□□ -0.39
TMED3-204ENST00000543455 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
TMED3-204ENST00000543455 C16orf90A8MZG2 172 aa12.63□□□□□ -0.39
TMED3-204ENST00000543455 KRTAP10-2P60368 255 aa12.63□□□□□ -0.39
TMED3-204ENST00000543455 GFRA4Q9GZZ7 299 aa12.63□□□□□ -0.39
TMED3-204ENST00000543455 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
TMED3-204ENST00000543455 SPATA12Q7Z6I5 190 aa12.62□□□□□ -0.39
TMED3-204ENST00000543455 TMSB15BA0A087X1C1 80 aa12.61□□□□□ -0.39
TMED3-204ENST00000543455 CXCL1P09341 107 aa12.61□□□□□ -0.39
TMED3-204ENST00000543455 Q6ZSN1 163 aa12.61□□□□□ -0.39
TMED3-204ENST00000543455 GZMBP10144 247 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 S100PP25815 95 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 FOXA3P55318 350 aaPredicted RBP12.6□□□□□ -0.39
TMED3-204ENST00000543455 KCNIP4Q6PIL6 250 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 GTSF1Q8WW33 167 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 YPEL4Q96NS1 127 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 JPT2Q9H910 190 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 ABCA13Q86UQ4 5058 aa12.6□□□□□ -0.39
TMED3-204ENST00000543455 TRBV6-4A0A1B0GX49 114 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 TIRAPP58753 221 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 UFSP1Q6NVU6 142 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 NAT8BQ9UHF3 227 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 URGCP-MRPS24S4R325 110 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 GRIFINA4D1Z8 144 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 HIGD1CA8MV81 97 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 CIDEAO60543 219 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 IGLC6P0CF74 106 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 ASIPP42127 132 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 ELOBQ15370 118 aa12.59□□□□□ -0.39
TMED3-204ENST00000543455 TRAV9-1A0A075B6T8 112 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 H3BVH4 76 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 RHOHQ15669 191 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 PIK3CD-AS1Q5SR53 167 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 SH2D6Q7Z4S9 175 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 NUP35Q8NFH5 326 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 SAMD10Q9BYL1 202 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 Q9UF83 564 aa12.58□□□□□ -0.4
TMED3-204ENST00000543455 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms