RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GAGE12JA6NER3 117 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 TPT1P13693 172 aaKnown RBP8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 GAGE1Q13065 139 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 GAGE4Q13068 117 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 GAGE5Q13069 117 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 GAGE13Q4V321 117 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 Q8N1X5 172 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 PHLDA3Q9Y5J5 127 aa8.77□□□□□ -1.01
TNFRSF1A-215ENST00000543359 A0A087WWL8 130 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 RHODO00212 210 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 EREGO14944 169 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 PFDN1O60925 122 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 IGHV3-30P01768 117 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 IGHV3-33P01772 117 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 IGHV3-30-3P0DP02 117 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 IGHV3-30-5P0DP03 117 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 KRTAP10-1P60331 282 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 RPL19P84098 196 aaKnown RBP8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 CDPF1Q6NVV7 123 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 BAGE2Q86Y30 109 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 TCTE3Q8IZS6 198 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 SSBP4Q9BWG4 385 aaPredicted RBP8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
TNFRSF1A-215ENST00000543359 M0R381 172 aa8.75□□□□□ -1.01
TNFRSF1A-215ENST00000543359 CXCL1P09341 107 aa8.75□□□□□ -1.01
TNFRSF1A-215ENST00000543359 XGP55808 180 aa8.75□□□□□ -1.01
TNFRSF1A-215ENST00000543359 ZFP82Q8N141 532 aa8.75□□□□□ -1.01
TNFRSF1A-215ENST00000543359 C11orf52Q96A22 123 aa8.75□□□□□ -1.01
TNFRSF1A-215ENST00000543359 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
TNFRSF1A-215ENST00000543359 SNAI2O43623 268 aa8.74□□□□□ -1.01
TNFRSF1A-215ENST00000543359 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
TNFRSF1A-215ENST00000543359 RPL35P42766 123 aaKnown RBP8.74□□□□□ -1.01
TNFRSF1A-215ENST00000543359 RAB5CP51148 216 aa8.74□□□□□ -1.01
TNFRSF1A-215ENST00000543359 FAM74A4Q5TZK3 123 aa8.74□□□□□ -1.01
TNFRSF1A-215ENST00000543359 DERL1Q9BUN8 251 aa8.74□□□□□ -1.01
TNFRSF1A-215ENST00000543359 OR5AL1P0C617 328 aa8.73□□□□□ -1.01
TNFRSF1A-215ENST00000543359 SULT1A2P50226 295 aa8.73□□□□□ -1.01
TNFRSF1A-215ENST00000543359 LAGE3Q14657 143 aa8.73□□□□□ -1.01
TNFRSF1A-215ENST00000543359 Q6ZNX1 250 aa8.73□□□□□ -1.01
TNFRSF1A-215ENST00000543359 OR10AG1Q8NH19 301 aa8.73□□□□□ -1.01
TNFRSF1A-215ENST00000543359 MANBALQ9NQG1 85 aa8.73□□□□□ -1.01
TNFRSF1A-215ENST00000543359 HERC1Q15751 4861 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 A0A087WWC5 75 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 TRBV10-1A0A0K0K1A3 114 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 PRR27Q6MZM9 219 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 DAZ4Q86SG3 579 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 OR10G8Q8NGN5 311 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 Q9HAA7 133 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 DAZ3Q9NR90 486 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 GNG13Q9P2W3 67 aa8.72□□□□□ -1.01
TNFRSF1A-215ENST00000543359 C1QBP02746 253 aa8.71□□□□□ -1.02
TNFRSF1A-215ENST00000543359 UBE2D3P61077 147 aa8.71□□□□□ -1.02
TNFRSF1A-215ENST00000543359 UBE2D2P62837 147 aa8.71□□□□□ -1.02
TNFRSF1A-215ENST00000543359 KIF25-AS1Q9Y6Z4 181 aa8.71□□□□□ -1.02
TNFRSF1A-215ENST00000543359 MUC21A0A0G2JKD1 596 aa8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 MUC21A0A140T8X8 626 aa8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 RAB4BP61018 213 aa8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 WFDC2Q14508 124 aa8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 EIF5AL1Q6IS14 154 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 NIT1Q86X76 327 aa8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 Q8N814 137 aa8.7□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TRBV20OR9-2A0A075B6H5 130 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TRBV7-3A0A075B6L6 115 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 PSCAO43653 123 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 GCSHP23434 173 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 CENPWQ5EE01 88 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 SLC51BQ86UW2 128 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 NEXN-AS1Q8NBZ9 246 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 DNAJC30Q96LL9 226 aa8.69□□□□□ -1.02
TNFRSF1A-215ENST00000543359 IGLC6P0CF74 106 aa8.68□□□□□ -1.02
TNFRSF1A-215ENST00000543359 GZMBP10144 247 aa8.68□□□□□ -1.02
TNFRSF1A-215ENST00000543359 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-215ENST00000543359 NTN5Q8WTR8 489 aaPredicted RBP8.68□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TRAV8-3A0A0A6YYJ7 113 aa8.67□□□□□ -1.02
TNFRSF1A-215ENST00000543359 RPL36AP83881 106 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-215ENST00000543359 C9orf62Q8N4C0 152 aa8.67□□□□□ -1.02
TNFRSF1A-215ENST00000543359 RPL36ALQ969Q0 106 aaKnown RBP8.67□□□□□ -1.02
TNFRSF1A-215ENST00000543359 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 RBFOX3A6NFN3 312 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TEX46H3BTG2 121 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 PDE6DO43924 150 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 BCL2P10415 239 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 SMIM12Q96EX1 92 aa8.66□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TRBV6-8A0A0A6YYG3 113 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 GNG4P50150 75 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 SSTP61278 116 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 ZNF56Q15929 161 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 TOR2AQ5JU69 321 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 CHCHD7Q9BUK0 85 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 KLK12Q9UKR0 248 aa8.65□□□□□ -1.02
TNFRSF1A-215ENST00000543359 ATRAIDQ6UW56 229 aa8.64□□□□□ -1.03
TNFRSF1A-215ENST00000543359 NTM-AS1Q6ZSK4 140 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms