RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 SMIM20Q8N5G0 67 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 GATD1Q8NB37 220 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 CSNK1G2-AS1Q8NCQ2 148 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 NTN5Q8WTR8 489 aaPredicted RBP3.66□□□□□ -1.82
CLIP1-217ENST00000543205 FAM210BQ96KR6 192 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 MANBALQ9NQG1 85 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 ZNF492Q9P255 531 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 GNG13Q9P2W3 67 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 ARL2-SNX15V9GYD0 113 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 AGRNO00468 2067 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 IFNA1P01562 189 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 GPX1P07203 203 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 RNASE4P34096 147 aaKnown RBP3.66□□□□□ -1.82
CLIP1-217ENST00000543205 CCL20P78556 96 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 C10orf25Q5T742 122 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 COMMD7Q86VX2 200 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 CYB561D1Q8N8Q1 229 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 Q8TAT8 98 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 HIST1H2BAQ96A08 127 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 C11orf52Q96A22 123 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 LINC01587Q99440 93 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 TCEAL7Q9BRU2 100 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 NDFIP1Q9BT67 221 aa3.66□□□□□ -1.82
CLIP1-217ENST00000543205 TRAV8-1A0A0A6YYK1 113 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 C7orf71A4D174 169 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 C11orf94C9JXX5 98 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 PEX7O00628 323 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 NMBP08949 121 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 ESDP10768 282 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 MIFP14174 115 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 CRISP2P16562 243 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 ATP5G3P48201 142 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 TEX261Q6UWH6 196 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 ZNF705AQ6ZN79 300 aaPredicted RBP3.65□□□□□ -1.82
CLIP1-217ENST00000543205 PRNTQ86SH4 94 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 C1orf158Q8N1D5 194 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 TMEM256Q8N2U0 113 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 TMEM75Q8N9X5 138 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 OR10G8Q8NGN5 311 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 FAM19A4Q96LR4 140 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 PSG8Q9UQ74 426 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 LENEPQ9Y5L5 61 aa3.65□□□□□ -1.82
CLIP1-217ENST00000543205 TRAV12-3A0A0B4J271 114 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 A0A0J9YWU9 116 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 KLLNB2CW77 178 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 E9PLD3 99 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 H7BYZ3 331 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 HTN1P15515 57 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 AKR1C3P42330 323 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 UBE2G1P62253 170 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 RRN3P1Q2M238 152 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 GFI1BQ5VTD9 330 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 UFSP1Q6NVU6 142 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 MRPL55Q7Z7F7 128 aaKnown RBP3.65□□□□□ -1.83
CLIP1-217ENST00000543205 FMC1Q96HJ9 113 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 TXNDC17Q9BRA2 123 aa3.65□□□□□ -1.83
CLIP1-217ENST00000543205 TMEM189A5PLL7 270 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 ZNF705GA8MUZ8 300 aaPredicted RBP3.64□□□□□ -1.83
CLIP1-217ENST00000543205 DEFB4AO15263 64 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 BCL2P10415 239 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 EMP1P54849 157 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 GAGE5Q13069 117 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 GAGE6Q13070 117 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 BTN1A1Q13410 526 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 RBMY1FQ15415 496 aaKnown RBP3.64□□□□□ -1.83
CLIP1-217ENST00000543205 NDUFA5Q16718 116 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 C1orf195Q5TG92 126 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 ZFAND2AQ8N6M9 145 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 CHCHD10Q8WYQ3 142 aaPredicted RBP3.64□□□□□ -1.83
CLIP1-217ENST00000543205 SFRP2Q96HF1 295 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 PGLYRP4Q96LB8 373 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 LINC00479Q96M42 142 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
CLIP1-217ENST00000543205 VAX2Q9UIW0 290 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 BIRC6Q9NR09 4857 aa3.64□□□□□ -1.83
CLIP1-217ENST00000543205 IGLV5-39A0A0G2JS06 123 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 TEX48A0A1B0GUV7 120 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 RBFOX3A6NFN3 312 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 PDE6DO43924 150 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 NXPH4O95158 308 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 IGLV2-11P01706 119 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 MEF2BQ02080 365 aaPredicted RBP3.63□□□□□ -1.83
CLIP1-217ENST00000543205 TMEM183BQ1AE95 376 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 PRR9Q5T870 116 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 REG3GQ6UW15 175 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 C6orf223Q8N319 242 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 Q8NAQ8 132 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 TVP23CQ96ET8 276 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 SIGMAR1Q99720 223 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 PYGO2Q9BRQ0 406 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 EDA2RQ9HAV5 297 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 ZFP30Q9Y2G7 519 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 TRAV21A0A0B4J279 112 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 IGHV3-38A0A0C4DH36 116 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 LINC00587B1AMM8 73 aa3.63□□□□□ -1.83
CLIP1-217ENST00000543205 ZNF324O75467 553 aaPredicted RBP3.63□□□□□ -1.83
CLIP1-217ENST00000543205 PPBPP02775 128 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms