RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 SMIM27A0A1W2PRY6 76 aa8.56□□□□□ -1.04
DDX55-210ENST00000543016 HIGD1CA8MV81 97 aa8.56□□□□□ -1.04
DDX55-210ENST00000543016 IGLL5B9A064 214 aa8.56□□□□□ -1.04
DDX55-210ENST00000543016 SMIM17P0DL12 118 aa8.56□□□□□ -1.04
DDX55-210ENST00000543016 HOXA5P20719 270 aa8.56□□□□□ -1.04
DDX55-210ENST00000543016 RNF212Q495C1 297 aa8.56□□□□□ -1.04
DDX55-210ENST00000543016 A0A1B0GUT8 65 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 A0A1B0GW15 77 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 PAX4O43316 350 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 CRYGDP07320 174 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 GATA1P15976 413 aaPredicted RBP8.55□□□□□ -1.04
DDX55-210ENST00000543016 NTF3P20783 257 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
DDX55-210ENST00000543016 CRYBA4P53673 196 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 TWIST1Q15672 202 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 UFSP1Q6NVU6 142 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 TMEM88Q6PEY1 159 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 SMIM15Q7Z3B0 74 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 IMMP2LQ96T52 175 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 TMEM242Q9NWH2 141 aa8.55□□□□□ -1.04
DDX55-210ENST00000543016 TRAV26-1A0A087WT03 109 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 RAB4BP61018 213 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 RIGQ13278 110 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 RHEBQ15382 184 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 SH2D6Q7Z4S9 175 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 SVBPQ8N300 66 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 NUP35Q8NFH5 326 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 PGLYRP4Q96LB8 373 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 PRADC1Q9BSG0 188 aa8.54□□□□□ -1.04
DDX55-210ENST00000543016 DNAH7Q8WXX0 4024 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 A0A087WWC5 75 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 MUC21A0A0G2JKD1 596 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 MUC21A0A140T8X8 626 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 S100A8P05109 93 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 RHOHQ15669 191 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 FRZBQ92765 325 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 JPT2Q9H910 190 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 APLNQ9ULZ1 77 aa8.53□□□□□ -1.04
DDX55-210ENST00000543016 A0A087WWL8 130 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 SNAPINO95295 136 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 MRPL23Q16540 153 aaKnown RBP8.52□□□□□ -1.05
DDX55-210ENST00000543016 FAM74A4Q5TZK3 123 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 C14orf178Q8N769 122 aaPredicted RBP8.52□□□□□ -1.05
DDX55-210ENST00000543016 CLRN3Q8NCR9 226 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 VSIG2Q96IQ7 327 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 SAMD10Q9BYL1 202 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 ICOSQ9Y6W8 199 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 KIF25-AS1Q9Y6Z4 181 aa8.52□□□□□ -1.05
DDX55-210ENST00000543016 TRAV9-1A0A075B6T8 112 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 C7orf77A4D0Y5 90 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 H7C1H1 209 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 APOC3P02656 99 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 SSTP61278 116 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 KCNIP4Q6PIL6 250 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 ATP5L2Q7Z4Y8 100 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 SLC25A29Q8N8R3 303 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
DDX55-210ENST00000543016 IGHV3-73A0A0B4J1V6 119 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 A0A0J9YY99 117 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 K7EQD1 137 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 P0DMU3 169 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 FAM231AP0DMU4 169 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 FAM231CP0DMU5 169 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 EVI2AP22794 236 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 LINC00315P59091 139 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 ZNF56Q15929 161 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 NACAE9PAV3 2078 aa8.5□□□□□ -1.05
DDX55-210ENST00000543016 F5H697 171 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 NUDT3O95989 172 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 GYPEP15421 78 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 S100PP25815 95 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 SRIP30626 198 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 FAM3BP58499 235 aaPredicted RBP8.49□□□□□ -1.05
DDX55-210ENST00000543016 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 BTF3L4Q96K17 158 aa8.49□□□□□ -1.05
DDX55-210ENST00000543016 CCL18P55774 89 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 HBBP68871 147 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 LGALS9CQ6DKI2 356 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 RASL11AQ6T310 242 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 Q6ZSN1 163 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 NEGR1Q7Z3B1 354 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 DNAJC30Q96LL9 226 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 RPS10P5Q9NQ39 176 aa8.48□□□□□ -1.05
DDX55-210ENST00000543016 A0A096LPF7 62 aa8.47□□□□□ -1.05
DDX55-210ENST00000543016 A0A1B0GXF2 115 aa8.47□□□□□ -1.05
DDX55-210ENST00000543016 MGPP08493 103 aa8.47□□□□□ -1.05
DDX55-210ENST00000543016 TIRAPP58753 221 aa8.47□□□□□ -1.05
DDX55-210ENST00000543016 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
DDX55-210ENST00000543016 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.47□□□□□ -1.05
DDX55-210ENST00000543016 GATD1Q8NB37 220 aa8.47□□□□□ -1.05
DDX55-210ENST00000543016 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
DDX55-210ENST00000543016 TRBV7-3A0A075B6L6 115 aa8.46□□□□□ -1.06
DDX55-210ENST00000543016 M0QY20 66 aa8.46□□□□□ -1.06
DDX55-210ENST00000543016 PPP1R17O96001 155 aa8.46□□□□□ -1.06
DDX55-210ENST00000543016 LINC00694P0DN24 101 aa8.45□□□□□ -1.06
DDX55-210ENST00000543016 CAMPP49913 170 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms