RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 TCAPO15273 167 aa10.41□□□□□ -0.74
LDB3-207ENST00000542786 RPL32P62910 135 aaKnown RBP10.41□□□□□ -0.74
LDB3-207ENST00000542786 ODF3L2Q3SX64 289 aa10.41□□□□□ -0.74
LDB3-207ENST00000542786 ZNF418Q8TF45 676 aaPredicted RBP10.41□□□□□ -0.74
LDB3-207ENST00000542786 CLUHP3Q96NS8 147 aa10.41□□□□□ -0.74
LDB3-207ENST00000542786 MRPS16Q9Y3D3 137 aaKnown RBP10.41□□□□□ -0.74
LDB3-207ENST00000542786 A0A1B0GV90 55 aa10.4□□□□□ -0.74
LDB3-207ENST00000542786 LY6G6DO95868 133 aa10.4□□□□□ -0.74
LDB3-207ENST00000542786 SMIM17P0DL12 118 aa10.4□□□□□ -0.74
LDB3-207ENST00000542786 TP73-AS1Q9UF72 201 aa10.4□□□□□ -0.74
LDB3-207ENST00000542786 GOLT1BQ9Y3E0 138 aa10.4□□□□□ -0.74
LDB3-207ENST00000542786 HNRNPA3P51991 378 aaKnown RBP10.4□□□□□ -0.75
LDB3-207ENST00000542786 PROK1P58294 105 aa10.4□□□□□ -0.75
LDB3-207ENST00000542786 SUMO4Q6EEV6 95 aa10.4□□□□□ -0.75
LDB3-207ENST00000542786 C18orf15Q96N68 181 aa10.4□□□□□ -0.75
LDB3-207ENST00000542786 ZMAT4Q9H898 229 aa10.4□□□□□ -0.75
LDB3-207ENST00000542786 TRGV11A0A075B6L2 103 aa10.39□□□□□ -0.75
LDB3-207ENST00000542786 CRYGDP07320 174 aa10.39□□□□□ -0.75
LDB3-207ENST00000542786 ODF1Q14990 250 aa10.39□□□□□ -0.75
LDB3-207ENST00000542786 A0A087WWL8 130 aa10.38□□□□□ -0.75
LDB3-207ENST00000542786 K7EMI3 77 aa10.38□□□□□ -0.75
LDB3-207ENST00000542786 PPP1R17O96001 155 aa10.38□□□□□ -0.75
LDB3-207ENST00000542786 LINC00467Q9BRT7 94 aa10.38□□□□□ -0.75
LDB3-207ENST00000542786 DKK2Q9UBU2 259 aa10.38□□□□□ -0.75
LDB3-207ENST00000542786 ANKRD39Q53RE8 183 aa10.38□□□□□ -0.75
LDB3-207ENST00000542786 TRBV6-5A0A0K0K1A5 114 aa10.37□□□□□ -0.75
LDB3-207ENST00000542786 HSBP1L1C9JCN9 74 aa10.37□□□□□ -0.75
LDB3-207ENST00000542786 ATP5LO75964 103 aa10.37□□□□□ -0.75
LDB3-207ENST00000542786 POLR2KP53803 58 aaKnown RBP10.37□□□□□ -0.75
LDB3-207ENST00000542786 MORN3Q6PF18 240 aaPredicted RBP10.37□□□□□ -0.75
LDB3-207ENST00000542786 SYT8Q8NBV8 401 aa10.37□□□□□ -0.75
LDB3-207ENST00000542786 FGF6P10767 208 aa10.36□□□□□ -0.75
LDB3-207ENST00000542786 CSTL1Q9H114 145 aa10.36□□□□□ -0.75
LDB3-207ENST00000542786 COX8AP10176 69 aa10.36□□□□□ -0.75
LDB3-207ENST00000542786 KRTAP10-3P60369 221 aa10.36□□□□□ -0.75
LDB3-207ENST00000542786 NUTF2P61970 127 aaKnown RBP10.36□□□□□ -0.75
LDB3-207ENST00000542786 ORMDL2Q53FV1 153 aa10.36□□□□□ -0.75
LDB3-207ENST00000542786 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
LDB3-207ENST00000542786 HIVEP2P31629 2446 aa10.35□□□□□ -0.75
LDB3-207ENST00000542786 CBY3A6NI87 242 aa10.35□□□□□ -0.75
LDB3-207ENST00000542786 M0QY20 66 aa10.35□□□□□ -0.75
LDB3-207ENST00000542786 SLC25A34Q6PIV7 304 aa10.35□□□□□ -0.75
LDB3-207ENST00000542786 CUBNO60494 3623 aa10.35□□□□□ -0.75
LDB3-207ENST00000542786 OTOGQ6ZRI0 2925 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 NUDT3O95989 172 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 NEGR1Q7Z3B1 354 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 TRPT1Q86TN4 253 aaKnown RBP10.34□□□□□ -0.75
LDB3-207ENST00000542786 STPG4Q8N801 248 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 C11orf72Q8NBR9 251 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 PTH2Q96A98 100 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 PRM2P04554 102 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 ZNF876PQ49A33 203 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 C2orf91Q6ZV80 131 aa10.34□□□□□ -0.75
LDB3-207ENST00000542786 SETD2Q9BYW2 2564 aaPredicted RBP10.33□□□□□ -0.76
LDB3-207ENST00000542786 PIK3CD-AS1Q5SR53 167 aa10.33□□□□□ -0.76
LDB3-207ENST00000542786 JMJD8Q96S16 334 aa10.33□□□□□ -0.76
LDB3-207ENST00000542786 EDA2RQ9HAV5 297 aa10.33□□□□□ -0.76
LDB3-207ENST00000542786 TRBV27A0A0K0K1C4 114 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 IGLV1-51P01701 117 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 PRSS1P07477 247 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 SETXQ7Z333 2677 aaKnown RBP10.32□□□□□ -0.76
LDB3-207ENST00000542786 A0A087WX48 190 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 INSP01308 110 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 FAM74A4Q5TZK3 123 aa10.32□□□□□ -0.76
LDB3-207ENST00000542786 WNK1Q9H4A3 2382 aa10.31□□□□□ -0.76
LDB3-207ENST00000542786 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
LDB3-207ENST00000542786 F5H697 171 aa10.31□□□□□ -0.76
LDB3-207ENST00000542786 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
LDB3-207ENST00000542786 BOD1L2Q8IYS8 172 aa10.31□□□□□ -0.76
LDB3-207ENST00000542786 C19orf73Q9NVV2 129 aa10.31□□□□□ -0.76
LDB3-207ENST00000542786 SDHAF1A6NFY7 115 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 M0R2P5 195 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 VCYO14598 125 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 DPM2O94777 84 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 RIPPLY3P57055 190 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 ZNF415Q09FC8 603 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 ZNF56Q15929 161 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 BATFQ16520 125 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 BEAN1Q3B7T3 259 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 C1orf158Q8N1D5 194 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 NEXN-AS1Q8NBZ9 246 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 MRPL35Q9NZE8 188 aaKnown RBP10.3□□□□□ -0.76
LDB3-207ENST00000542786 NOTCH2Q04721 2471 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
LDB3-207ENST00000542786 DLEU1O43261 78 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 IGKCP01834 107 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 HINT1P49773 126 aaPredicted RBP10.3□□□□□ -0.76
LDB3-207ENST00000542786 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
LDB3-207ENST00000542786 SAP30O75446 220 aa10.29□□□□□ -0.76
LDB3-207ENST00000542786 GIG44P09565 113 aaPredicted RBP10.29□□□□□ -0.76
LDB3-207ENST00000542786 NSUN5P1Q3KNT7 163 aa10.29□□□□□ -0.76
LDB3-207ENST00000542786 COL5A1-AS1Q5SY13 56 aa10.29□□□□□ -0.76
LDB3-207ENST00000542786 NDUFA11Q86Y39 141 aa10.29□□□□□ -0.76
LDB3-207ENST00000542786 IGIPA6NJ69 53 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms