RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 PLAC8L1A1L4L8 177 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 SPINK4O60575 86 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 AZU1P20160 251 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 RAB5AP20339 215 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 RASL10AQ92737 203 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 TM2D3Q9BRN9 247 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 TMEM191AQ9H0A3 160 aa8.83□□□□□ -1
CACNA1C-IT3-201ENST00000542680 LYRM9A8MSI8 78 aa8.82□□□□□ -1
CACNA1C-IT3-201ENST00000542680 A8MWV9 139 aa8.82□□□□□ -1
CACNA1C-IT3-201ENST00000542680 M0R381 172 aa8.82□□□□□ -1
CACNA1C-IT3-201ENST00000542680 ZNF876PQ49A33 203 aa8.82□□□□□ -1
CACNA1C-IT3-201ENST00000542680 Q8NAQ8 132 aa8.82□□□□□ -1
CACNA1C-IT3-201ENST00000542680 FRZBQ92765 325 aa8.82□□□□□ -1
CACNA1C-IT3-201ENST00000542680 CIDEAO60543 219 aa8.81□□□□□ -1
CACNA1C-IT3-201ENST00000542680 CAMPP49913 170 aa8.81□□□□□ -1
CACNA1C-IT3-201ENST00000542680 TMEM136Q6ZRR5 245 aa8.81□□□□□ -1
CACNA1C-IT3-201ENST00000542680 C18orf15Q96N68 181 aa8.81□□□□□ -1
CACNA1C-IT3-201ENST00000542680 C11orf68Q9H3H3 251 aaKnown RBP8.81□□□□□ -1
CACNA1C-IT3-201ENST00000542680 IGHV4-28A0A0C4DH34 117 aa8.8□□□□□ -1
CACNA1C-IT3-201ENST00000542680 RHODO00212 210 aa8.8□□□□□ -1
CACNA1C-IT3-201ENST00000542680 RPS10P46783 165 aaKnown RBP8.8□□□□□ -1
CACNA1C-IT3-201ENST00000542680 SBSPONQ8IVN8 264 aa8.8□□□□□ -1
CACNA1C-IT3-201ENST00000542680 LINC00612Q8N6U2 182 aa8.8□□□□□ -1
CACNA1C-IT3-201ENST00000542680 DPH3P1Q9H4G8 78 aa8.8□□□□□ -1
CACNA1C-IT3-201ENST00000542680 MUC21A0A0G2JKD1 596 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 MUC21A0A140T8X8 626 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 PRM2P04554 102 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 SMIM17P0DL12 118 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 RAB4BP61018 213 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 FAM104BQ5XKR9 115 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 ZMAT4Q9H898 229 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 NOP10Q9NPE3 64 aaKnown RBP8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 MSRB1Q9NZV6 116 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 TRAPPC1Q9Y5R8 145 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 KMT2AQ03164 3969 aa8.79□□□□□ -1
CACNA1C-IT3-201ENST00000542680 TRGV1A0A0A0MS02 117 aa8.78□□□□□ -1
CACNA1C-IT3-201ENST00000542680 RS1O15537 224 aa8.78□□□□□ -1
CACNA1C-IT3-201ENST00000542680 ZFP2Q6ZN57 461 aa8.78□□□□□ -1
CACNA1C-IT3-201ENST00000542680 POM121L12Q8N7R1 296 aa8.78□□□□□ -1
CACNA1C-IT3-201ENST00000542680 KIF25-AS1Q9Y6Z4 181 aa8.78□□□□□ -1
CACNA1C-IT3-201ENST00000542680 TRAV4A0A0B4J268 109 aa8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 APCSP02743 223 aa8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 PPBPP02775 128 aa8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 EVI2AP22794 236 aa8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 EDA2RQ9HAV5 297 aa8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 MRPL16Q9NX20 251 aaKnown RBP8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 DKK2Q9UBU2 259 aa8.77□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 CRYGDP07320 174 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 SPART-AS1P0CW21 52 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 SSTP61278 116 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 SLAQ13239 276 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 CFAP126Q5VTH2 177 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 Q6ZTI0 123 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 AMN1Q8IY45 258 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 C14orf178Q8N769 122 aaPredicted RBP8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 MRAP2Q96G30 205 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 LAMTOR2Q9Y2Q5 125 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 PKHD1P08F94 4074 aa8.76□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 PPP1R17O96001 155 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 RAB4AP20338 218 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 LINC00315P59091 139 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 FABP9Q0Z7S8 132 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 FAM222AQ5U5X8 452 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 UFSP1Q6NVU6 142 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 OR4C5Q8NGB2 326 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 RNF185Q96GF1 192 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 RETNQ9HD89 108 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 TRGV2A0A075B6R0 118 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 C1orf196B1AJZ1 125 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 H7C1H1 209 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 PHOX2AO14813 284 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 TRGC2P03986 189 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 EMP1P54849 157 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 MRPL51Q4U2R6 128 aaKnown RBP8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 ORMDL3Q8N138 153 aa8.74□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 A0A087WWL8 130 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 GAGE12BA1L429 117 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 GAGE7O76087 117 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 GAGE12FP0CL80 117 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 GAGE12GP0CL81 117 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 GAGE12IP0CL82 117 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 FAM74A4Q5TZK3 123 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 JPT2Q9H910 190 aa8.73□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 MGPP08493 103 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 CKS2P33552 79 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 RAB5BP61020 215 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 DAD1P61803 113 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 ZNF56Q15929 161 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 SAMD10Q9BYL1 202 aa8.72□□□□□ -1.01
CACNA1C-IT3-201ENST00000542680 D6R8Y8 96 aa8.71□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 DEFB130BP0DP73 79 aa8.71□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 DEFB130AP0DP74 79 aa8.71□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 ALKBH7Q9BT30 221 aaPredicted RBP8.71□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 KRTAP4-5Q9BYR2 181 aa8.71□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TRBV10-1A0A0K0K1A3 114 aa8.7□□□□□ -1.02
CACNA1C-IT3-201ENST00000542680 TRBV6-4A0A1B0GX49 114 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms