RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 H3BS24 57 aa8.51□□□□□ -1.05
CDH3-203ENST00000542274 UPK2O00526 184 aa8.51□□□□□ -1.05
CDH3-203ENST00000542274 UBE2L3P68036 154 aaKnown RBP8.51□□□□□ -1.05
CDH3-203ENST00000542274 KHDC1LQ5JSQ8 128 aa8.51□□□□□ -1.05
CDH3-203ENST00000542274 IGKV1OR2-108A0A075B7D4 117 aa8.51□□□□□ -1.05
CDH3-203ENST00000542274 UBE2D1P51668 147 aa8.51□□□□□ -1.05
CDH3-203ENST00000542274 Q71RC1 249 aaPredicted RBP8.51□□□□□ -1.05
CDH3-203ENST00000542274 WI2-2373I1.2A0A1W2PRP0 233 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 EPM2AB3EWF7 344 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 H3BT86 120 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 CHD6Q8TD26 2715 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 TEX22C9J3V5 150 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 IGHV1-8P0DP01 117 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 IFI27P40305 119 aaPredicted RBP8.5□□□□□ -1.05
CDH3-203ENST00000542274 WNK2Q9Y3S1 2297 aa8.5□□□□□ -1.05
CDH3-203ENST00000542274 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 COX7A1P24310 79 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 RUSC1-AS1Q66K80 236 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 FP248Q71RG6 208 aaPredicted RBP8.49□□□□□ -1.05
CDH3-203ENST00000542274 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 Q9UF83 564 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 HOXB4P17483 251 aaPredicted RBP8.49□□□□□ -1.05
CDH3-203ENST00000542274 PRCDQ00LT1 54 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 PGLYRP4Q96LB8 373 aa8.49□□□□□ -1.05
CDH3-203ENST00000542274 HBDP02042 147 aa8.48□□□□□ -1.05
CDH3-203ENST00000542274 C11orf71Q6IPW1 123 aa8.48□□□□□ -1.05
CDH3-203ENST00000542274 RNF182Q8N6D2 247 aa8.48□□□□□ -1.05
CDH3-203ENST00000542274 LINC01619G3V211 115 aa8.48□□□□□ -1.05
CDH3-203ENST00000542274 WT1-ASQ06250 92 aa8.48□□□□□ -1.05
CDH3-203ENST00000542274 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
CDH3-203ENST00000542274 IGLV2-23P01705 113 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 RNASE2P10153 161 aaKnown RBP8.47□□□□□ -1.05
CDH3-203ENST00000542274 SS18Q15532 418 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 ZNF843Q8N446 348 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
CDH3-203ENST00000542274 KAAG1Q9UBP8 84 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 SERP1Q9Y6X1 66 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 IGHV3-21A0A0B4J1V1 117 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 LOC389332A0A1B0GUA5 103 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 MIR17HGQ75NE6 70 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 MRPL55Q7Z7F7 128 aaKnown RBP8.47□□□□□ -1.05
CDH3-203ENST00000542274 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
CDH3-203ENST00000542274 CIRBPQ14011 172 aaKnown RBP8.46□□□□□ -1.05
CDH3-203ENST00000542274 MRGPRG-AS1Q2M3A8 158 aa8.46□□□□□ -1.05
CDH3-203ENST00000542274 TMEM170BQ5T4T1 132 aa8.46□□□□□ -1.05
CDH3-203ENST00000542274 NDUFA11Q86Y39 141 aa8.46□□□□□ -1.05
CDH3-203ENST00000542274 NDUFA4L2Q9NRX3 87 aa8.46□□□□□ -1.05
CDH3-203ENST00000542274 UBR5O95071 2799 aaPredicted RBP8.46□□□□□ -1.05
CDH3-203ENST00000542274 HIST1H4AP62805 103 aaKnown RBP8.46□□□□□ -1.06
CDH3-203ENST00000542274 MORN5Q5VZ52 161 aa8.46□□□□□ -1.06
CDH3-203ENST00000542274 U3KQE9 123 aa8.46□□□□□ -1.06
CDH3-203ENST00000542274 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 HCP5Q6MZN7 132 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 SERP2Q8N6R1 65 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 C1orf158Q8N1D5 194 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 POLQO75417 2590 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 PRR20EP86478 221 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 PRR20CP86479 221 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 PRR20DP86480 221 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 PRR20BP86481 221 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 PRR20AP86496 221 aa8.45□□□□□ -1.06
CDH3-203ENST00000542274 P0DMU3 169 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 FAM231AP0DMU4 169 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 FAM231CP0DMU5 169 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 CXCL5P42830 114 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 HILS1P60008 231 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 FHL2Q14192 279 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 TMEM30BQ3MIR4 351 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 LINC00643Q86TS7 51 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 AMMECR1Q9Y4X0 333 aaPredicted RBP8.44□□□□□ -1.06
CDH3-203ENST00000542274 NCBP2LA6PVI3 153 aaKnown RBP8.44□□□□□ -1.06
CDH3-203ENST00000542274 IGLV1-47P01700 117 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 C9orf139Q6ZV77 190 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 SMCR5Q8TEV8 140 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 LINC01600Q96MT4 127 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 METTL26Q96S19 204 aa8.44□□□□□ -1.06
CDH3-203ENST00000542274 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 PAX4O43316 350 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 C2orf83Q53S99 150 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 TMEM167AQ8TBQ9 72 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 SPRY2O43597 315 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 TWIST1Q15672 202 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 PRSS22Q9GZN4 317 aa8.43□□□□□ -1.06
CDH3-203ENST00000542274 IGHV1-3A0A0C4DH29 117 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 BUB1B-PAK6H3BSN5 160 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 UBE2E1P51965 193 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 SYNJ2BPP57105 145 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 DAZ2Q13117 558 aaKnown RBP8.42□□□□□ -1.06
CDH3-203ENST00000542274 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
CDH3-203ENST00000542274 UBE2E2Q96LR5 201 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 DAZ1Q9NQZ3 744 aaKnown RBP8.42□□□□□ -1.06
CDH3-203ENST00000542274 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
CDH3-203ENST00000542274 PRSS1P07477 247 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 ERHP84090 104 aaKnown RBP8.42□□□□□ -1.06
CDH3-203ENST00000542274 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
CDH3-203ENST00000542274 C2orf82Q6UX34 121 aa8.42□□□□□ -1.06
CDH3-203ENST00000542274 TRAV40A0A0B4J280 105 aa8.41□□□□□ -1.06
CDH3-203ENST00000542274 ORMDL2Q53FV1 153 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms