RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
TRPM1-203ENST00000542188 Q8N9L7 120 aa10.85□□□□□ -0.67
TRPM1-203ENST00000542188 KIF26BQ2KJY2 2108 aa10.85□□□□□ -0.67
TRPM1-203ENST00000542188 P0DMU3 169 aa10.85□□□□□ -0.67
TRPM1-203ENST00000542188 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
TRPM1-203ENST00000542188 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
TRPM1-203ENST00000542188 TMEM263Q8WUH6 116 aaKnown RBP10.85□□□□□ -0.67
TRPM1-203ENST00000542188 ICE1Q9Y2F5 2266 aa10.84□□□□□ -0.67
TRPM1-203ENST00000542188 IGLV3-1P01715 115 aa10.84□□□□□ -0.67
TRPM1-203ENST00000542188 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
TRPM1-203ENST00000542188 IGFL3Q6UXB1 125 aa10.84□□□□□ -0.67
TRPM1-203ENST00000542188 LOXL1Q08397 574 aaPredicted RBP10.84□□□□□ -0.67
TRPM1-203ENST00000542188 TPRP12270 2363 aaKnown RBP10.84□□□□□ -0.67
TRPM1-203ENST00000542188 PATE2Q6UY27 113 aa10.83□□□□□ -0.67
TRPM1-203ENST00000542188 HIGD2AQ9BW72 106 aa10.83□□□□□ -0.68
TRPM1-203ENST00000542188 IGHV7-81A0A0B4J1V7 117 aa10.83□□□□□ -0.68
TRPM1-203ENST00000542188 CTSGP08311 255 aa10.83□□□□□ -0.68
TRPM1-203ENST00000542188 K7ENP7 123 aa10.83□□□□□ -0.68
TRPM1-203ENST00000542188 ARHGEF17Q96PE2 2063 aaPredicted RBP10.83□□□□□ -0.68
TRPM1-203ENST00000542188 FAM19A1Q7Z5A9 133 aa10.82□□□□□ -0.68
TRPM1-203ENST00000542188 SPRY4Q9C004 299 aa10.82□□□□□ -0.68
TRPM1-203ENST00000542188 FANCMQ8IYD8 2048 aa10.82□□□□□ -0.68
TRPM1-203ENST00000542188 H7C423 109 aa10.82□□□□□ -0.68
TRPM1-203ENST00000542188 ZFAND2AQ8N6M9 145 aa10.82□□□□□ -0.68
TRPM1-203ENST00000542188 FREM3P0C091 2139 aa10.82□□□□□ -0.68
TRPM1-203ENST00000542188 TP53BP1Q12888 1972 aaPredicted RBP10.82□□□□□ -0.68
TRPM1-203ENST00000542188 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 ESM1Q9NQ30 184 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 FAM186AA6NE01 2351 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 SMIM26A0A096LP01 95 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 TRBV30A0A0K0K1B3 111 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 ZNF503-AS2A6NEH8 195 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 Q8NFD4 153 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 WT1P19544 449 aaPredicted RBP10.81□□□□□ -0.68
TRPM1-203ENST00000542188 COX7CP15954 63 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 FAM167A-AS1Q96KT0 104 aa10.81□□□□□ -0.68
TRPM1-203ENST00000542188 IGKV1-17P01599 117 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 TMEM89A2RUT3 159 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 SNURFQ9Y675 71 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 IGHV4-30-2A0A087WSY4 118 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 C2orf70A6NJV1 201 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 KMT2EQ8IZD2 1858 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 PRAC2D3DTV9 90 aa10.8□□□□□ -0.68
TRPM1-203ENST00000542188 GREB1Q4ZG55 1949 aa10.79□□□□□ -0.68
TRPM1-203ENST00000542188 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
TRPM1-203ENST00000542188 LCTP09848 1927 aa10.78□□□□□ -0.68
TRPM1-203ENST00000542188 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
TRPM1-203ENST00000542188 MYCNOSP40205 109 aa10.78□□□□□ -0.68
TRPM1-203ENST00000542188 IBA57-AS1B1ANH7 110 aa10.78□□□□□ -0.68
TRPM1-203ENST00000542188 C4orf3Q8WVX3 66 aa10.78□□□□□ -0.68
TRPM1-203ENST00000542188 IL17DQ8TAD2 202 aa10.77□□□□□ -0.68
TRPM1-203ENST00000542188 C19orf71A6NCJ1 209 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 SCN5AQ14524 2016 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 PLXNA1Q9UIW2 1896 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 TMEM223A0PJW6 202 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 C9orf85Q96MD7 179 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 RETNQ9HD89 108 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 TNRC6BQ9UPQ9 1833 aaKnown RBP10.77□□□□□ -0.69
TRPM1-203ENST00000542188 A0A0J9YWU9 116 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 CCKP06307 115 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 REG3AQ06141 175 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 PROK2Q9HC23 129 aa10.77□□□□□ -0.69
TRPM1-203ENST00000542188 SLPIP03973 132 aa10.76□□□□□ -0.69
TRPM1-203ENST00000542188 RSPO1Q2MKA7 263 aaPredicted RBP10.76□□□□□ -0.69
TRPM1-203ENST00000542188 C5orf56Q8N8D9 126 aa10.76□□□□□ -0.69
TRPM1-203ENST00000542188 Q8N9W7 124 aa10.76□□□□□ -0.69
TRPM1-203ENST00000542188 IGKV2-24A0A0C4DH68 120 aa10.76□□□□□ -0.69
TRPM1-203ENST00000542188 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
TRPM1-203ENST00000542188 TRIAP1O43715 76 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 PRSS33Q8NF86 280 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 LINC00308Q8TCZ7 52 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 DOCK11Q5JSL3 2073 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 SIRPDQ9H106 197 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 BRCA1P38398 1863 aaKnown RBP10.75□□□□□ -0.69
TRPM1-203ENST00000542188 PMAIP1Q13794 54 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 FAM222AQ5U5X8 452 aa10.75□□□□□ -0.69
TRPM1-203ENST00000542188 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
TRPM1-203ENST00000542188 C11orf53Q8IXP5 236 aa10.74□□□□□ -0.69
TRPM1-203ENST00000542188 SVILO95425 2214 aa10.74□□□□□ -0.69
TRPM1-203ENST00000542188 MYO7BQ6PIF6 2116 aa10.74□□□□□ -0.69
TRPM1-203ENST00000542188 IGKV1D-37A0A075B6S9 117 aa10.74□□□□□ -0.69
TRPM1-203ENST00000542188 MRPS12O15235 138 aaKnown RBP10.74□□□□□ -0.69
TRPM1-203ENST00000542188 J3QKU1 62 aa10.74□□□□□ -0.69
TRPM1-203ENST00000542188 AHCTF1Q8WYP5 2266 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 CEMP1Q6PRD7 247 aaPredicted RBP10.73□□□□□ -0.69
TRPM1-203ENST00000542188 LINC00269Q8N2A0 174 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 CACNA1DQ01668 2161 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 A0A087WZ39 114 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 A0A096LNI7 61 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 A0A1B0GXF2 115 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 CHCHD10Q8WYQ3 142 aaPredicted RBP10.73□□□□□ -0.69
TRPM1-203ENST00000542188 CCDC179H3BU77 68 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 PTPRZ1P23471 2315 aaPredicted RBP10.73□□□□□ -0.69
TRPM1-203ENST00000542188 ANK1P16157 1881 aa10.73□□□□□ -0.69
TRPM1-203ENST00000542188 A0A0J9YX75 114 aa10.72□□□□□ -0.69
TRPM1-203ENST00000542188 C1orf158Q8N1D5 194 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms