RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CXorf51AA0A1B0GTR3 108 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 HCG22E2RYF7 251 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 ATOX1O00244 68 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 IGLV6-57P01721 117 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 IGHV3-33P01772 117 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 NMBP08949 121 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 RNASE2P10153 161 aaKnown RBP1.77□□□□□ -2.13
LEMD3-204ENST00000542032 TDRG1Q3Y452 100 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 LYPD5Q6UWN5 251 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 ZNF720Q7Z2F6 126 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 TSLPQ969D9 159 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 CRCT1Q9UGL9 99 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 PTPRFP10586 1907 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 MYH8P13535 1937 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 PLXNA4Q9HCM2 1894 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 PARP14Q460N5 1801 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 CUL9Q8IWT3 2517 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 LAMB4A4D0S4 1761 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 LAMB2P55268 1798 aa1.77□□□□□ -2.13
LEMD3-204ENST00000542032 HEATR1Q9H583 2144 aaKnown RBP1.76□□□□□ -2.13
LEMD3-204ENST00000542032 ZSWIM8A7E2V4 1837 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 TRBV6-8A0A0A6YYG3 113 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 A0A1W2PNN7 141 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 NAP1L6A6NFF2 107 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 MRPS14O60783 128 aaKnown RBP1.76□□□□□ -2.13
LEMD3-204ENST00000542032 IGKV1-17P01599 117 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 IGLV3-19P01714 112 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 SEC11AP67812 179 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 CCL8P80075 99 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 TPRXLQ17RH7 258 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 CSAG1Q6PB30 78 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 ALKAL2Q6UX46 152 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 FAM213BQ8TBF2 198 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 S100A16Q96FQ6 103 aaKnown RBP1.76□□□□□ -2.13
LEMD3-204ENST00000542032 LINC00052Q96N35 136 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 C20orf78Q9BR46 151 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
LEMD3-204ENST00000542032 GOLGA3Q08378 1498 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 CEP162Q5TB80 1403 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 UACAQ9BZF9 1416 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 SHANK1Q9Y566 2161 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 MUC22E2RYF6 1773 aaPredicted RBP1.75□□□□□ -2.13
LEMD3-204ENST00000542032 NUMA1Q14980 2115 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 H3BRM9 83 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 CCL16O15467 120 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 SFT2D2O95562 160 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 MPV17LQ2QL34 196 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 IFI27L1Q96BM0 104 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 MGST2Q99735 147 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 MRPL36Q9P0J6 103 aaKnown RBP1.75□□□□□ -2.13
LEMD3-204ENST00000542032 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 ABCC3O15438 1527 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 MAP3K1Q13233 1512 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 SBF2Q86WG5 1849 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 MYOFQ9NZM1 2061 aa1.75□□□□□ -2.13
LEMD3-204ENST00000542032 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 TRBV10-1A0A0K0K1A3 114 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 TRBV7-7A0A0K0K1E9 115 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 SMIM31A0A1B0GVY4 71 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 SDHAF1A6NFY7 115 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 PCNX2A6NKB5 2137 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 NUPR1O60356 82 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 NDUFA11Q86Y39 141 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 SPACA4Q8TDM5 124 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 CDC42SE1Q9NRR8 79 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 UQCR10Q9UDW1 63 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 ERICH3Q5RHP9 1530 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 CDK12Q9NYV4 1490 aaPredicted RBP1.74□□□□□ -2.13
LEMD3-204ENST00000542032 MARF1Q9Y4F3 1742 aaKnown RBP1.74□□□□□ -2.13
LEMD3-204ENST00000542032 CASP8AP2Q9UKL3 1982 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 CEP192Q8TEP8 1941 aa1.74□□□□□ -2.13
LEMD3-204ENST00000542032 PATJQ8NI35 1801 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 IGLC7A0M8Q6 106 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 CRYM-AS1A6NIL9 109 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 SIX6O95475 246 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 TRAPPC2P0DI81 140 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 TRAPPC2BP0DI82 140 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 PRR9Q5T870 116 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 SERP2Q8N6R1 65 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 PATE1Q8WXA2 126 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 TNS1Q9HBL0 1735 aaKnown RBP1.73□□□□□ -2.13
LEMD3-204ENST00000542032 PXDNLA1KZ92 1463 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 PTPRMP28827 1452 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 MPDZO75970 2070 aa1.73□□□□□ -2.13
LEMD3-204ENST00000542032 PLIN4Q96Q06 1357 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 LAMB1P07942 1786 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 IGKV2-24A0A0C4DH68 120 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 A0A0J9YY99 117 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 NUPR2A6NF83 97 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 H3BRN7 92 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 APOC3P02656 99 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 C10orf128Q5T292 105 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 ZNF818PQ6ZRF7 136 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 TRGV9Q99603 122 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 MANBALQ9NQG1 85 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 CACFD1Q9UGQ2 172 aa1.72□□□□□ -2.13
LEMD3-204ENST00000542032 RABAC1Q9UI14 185 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms