RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 CIDEAO60543 219 aa6.63□□□□□ -1.35
YBX3-212ENST00000542002 SSTP61278 116 aa6.63□□□□□ -1.35
YBX3-212ENST00000542002 LINC00336Q6ZUF6 198 aa6.63□□□□□ -1.35
YBX3-212ENST00000542002 WFDC10BQ8IUB3 73 aa6.63□□□□□ -1.35
YBX3-212ENST00000542002 DYNC1H1Q14204 4646 aaKnown RBP6.62□□□□□ -1.35
YBX3-212ENST00000542002 SIVA1O15304 175 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 CXCL1P09341 107 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 OR5AL1P0C617 328 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 IGLC6P0CF74 106 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 LINC00694P0DN24 101 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 TAGLN2P37802 199 aaKnown RBP6.62□□□□□ -1.35
YBX3-212ENST00000542002 TNP2Q05952 138 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 RHOHQ15669 191 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 TEX261Q6UWH6 196 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 ZFP82Q8N141 532 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 C6orf223Q8N319 242 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 SYT8Q8NBV8 401 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 NUDT10Q8NFP7 164 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 NUDT11Q96G61 164 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 PRADC1Q9BSG0 188 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 MSRB1Q9NZV6 116 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 KIF25-AS1Q9Y6Z4 181 aa6.62□□□□□ -1.35
YBX3-212ENST00000542002 GAGE12JA6NER3 117 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 C9JQL5 133 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 LINC00315P59091 139 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
YBX3-212ENST00000542002 GAGE1Q13065 139 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 GAGE4Q13068 117 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 GAGE5Q13069 117 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 GAGE13Q4V321 117 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 TOR2AQ5JU69 321 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 FAM74A4Q5TZK3 123 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 OR2D3Q8NGH3 330 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 DAZAP1Q96EP5 407 aaKnown RBP6.61□□□□□ -1.35
YBX3-212ENST00000542002 SMIM12Q96EX1 92 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 FAM210AQ96ND0 272 aa6.61□□□□□ -1.35
YBX3-212ENST00000542002 RNASE7Q9H1E1 156 aaKnown RBP6.61□□□□□ -1.35
YBX3-212ENST00000542002 A0A1W2PPQ1 181 aa6.6□□□□□ -1.35
YBX3-212ENST00000542002 TMEM250H0YL14 139 aa6.6□□□□□ -1.35
YBX3-212ENST00000542002 P01737 135 aa6.6□□□□□ -1.35
YBX3-212ENST00000542002 SRP19P09132 144 aaKnown RBP6.6□□□□□ -1.35
YBX3-212ENST00000542002 TIRAPP58753 221 aa6.6□□□□□ -1.35
YBX3-212ENST00000542002 XP32Q5T750 250 aa6.6□□□□□ -1.35
YBX3-212ENST00000542002 EIF5A2Q9GZV4 153 aaKnown RBP6.6□□□□□ -1.35
YBX3-212ENST00000542002 DNAH10OSP0CZ25 163 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 CEBPGP53567 150 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 SPANXN1Q5VSR9 72 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 LYZL1Q6UWQ5 148 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 Q6ZRN7 208 aaPredicted RBP6.59□□□□□ -1.35
YBX3-212ENST00000542002 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 Q8N3U1 123 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 ATP6V0E2Q8NHE4 81 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 TPPP3Q9BW30 176 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 GTSF1LQ9H1H1 148 aa6.59□□□□□ -1.35
YBX3-212ENST00000542002 RHODO00212 210 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 RPS20P60866 119 aaKnown RBP6.58□□□□□ -1.36
YBX3-212ENST00000542002 TTC32Q5I0X7 151 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 SOHLH1Q5JUK2 328 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 FER1L6-AS1Q8NA97 138 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 GTSF1Q8WW33 167 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 KIAA1109Q2LD37 5005 aa6.58□□□□□ -1.36
YBX3-212ENST00000542002 HERC2O95714 4834 aa6.57□□□□□ -1.36
YBX3-212ENST00000542002 RAB4BP61018 213 aa6.57□□□□□ -1.36
YBX3-212ENST00000542002 LELP1Q5T871 98 aa6.57□□□□□ -1.36
YBX3-212ENST00000542002 KRTAP4-8Q9BYQ9 185 aa6.57□□□□□ -1.36
YBX3-212ENST00000542002 RPP21Q9H633 154 aaKnown RBP6.57□□□□□ -1.36
YBX3-212ENST00000542002 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
YBX3-212ENST00000542002 DNAH5Q8TE73 4624 aa6.57□□□□□ -1.36
YBX3-212ENST00000542002 IGHV3-38A0A0C4DH36 116 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 NDUFS6O75380 124 aaKnown RBP6.56□□□□□ -1.36
YBX3-212ENST00000542002 NTF3P20783 257 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 EVI2AP22794 236 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 FOXA3P55318 350 aaPredicted RBP6.56□□□□□ -1.36
YBX3-212ENST00000542002 UBE2D3P61077 147 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 UBE2D2P62837 147 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 OR10J3Q5JRS4 329 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 LINC01551Q86U37 167 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 NEXN-AS1Q8NBZ9 246 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 OR10G8Q8NGN5 311 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 SMIM7Q9BQ49 75 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 BIN3Q9NQY0 253 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
YBX3-212ENST00000542002 TRBV7-3A0A075B6L6 115 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 TRAV8-6A0A0B4J262 113 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 ZNF727A8MUV8 499 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 F2Z2F3 143 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 M0QY20 66 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 IGHV3-30P01768 117 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 IGHV3-33P01772 117 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 IGHV3-30-3P0DP02 117 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 IGHV3-30-5P0DP03 117 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 CTRLP40313 264 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 CACNG7P62955 275 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 ZNF56Q15929 161 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 LINC01556Q5JQF7 62 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 FAM231DQ6ZW35 169 aa6.55□□□□□ -1.36
YBX3-212ENST00000542002 CNFNQ9BYD5 112 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms