RNA–Protein interactions for RNA: ENST00000541960.5

GABARAPL1-210, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 3,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-210ENST00000541960 DEFB125Q8N687 156 aa12.94□□□□□ -0.34
GABARAPL1-210ENST00000541960 POM121L12Q8N7R1 296 aa12.94□□□□□ -0.34
GABARAPL1-210ENST00000541960 Q8N8P6 123 aa12.94□□□□□ -0.34
GABARAPL1-210ENST00000541960 C14orf144Q96I85 54 aa12.94□□□□□ -0.34
GABARAPL1-210ENST00000541960 A0A087WWL8 130 aa12.93□□□□□ -0.34
GABARAPL1-210ENST00000541960 SPATA45Q537H7 98 aa12.93□□□□□ -0.34
GABARAPL1-210ENST00000541960 TENM1Q9UKZ4 2725 aa12.93□□□□□ -0.34
GABARAPL1-210ENST00000541960 HTN1P15515 57 aa12.93□□□□□ -0.34
GABARAPL1-210ENST00000541960 CBY3A6NI87 242 aa12.92□□□□□ -0.34
GABARAPL1-210ENST00000541960 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
GABARAPL1-210ENST00000541960 VWFP04275 2813 aa12.92□□□□□ -0.34
GABARAPL1-210ENST00000541960 IGLV1-51P01701 117 aa12.92□□□□□ -0.34
GABARAPL1-210ENST00000541960 PET117Q6UWS5 81 aa12.92□□□□□ -0.34
GABARAPL1-210ENST00000541960 TCAPO15273 167 aa12.91□□□□□ -0.34
GABARAPL1-210ENST00000541960 NDUFAF3Q9BU61 184 aa12.91□□□□□ -0.34
GABARAPL1-210ENST00000541960 DEFA6Q01524 100 aa12.91□□□□□ -0.34
GABARAPL1-210ENST00000541960 NDUFA11Q86Y39 141 aa12.91□□□□□ -0.34
GABARAPL1-210ENST00000541960 LINC01545Q5VT33 79 aa12.9□□□□□ -0.34
GABARAPL1-210ENST00000541960 TRGV11A0A075B6L2 103 aa12.9□□□□□ -0.34
GABARAPL1-210ENST00000541960 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
GABARAPL1-210ENST00000541960 CRLF1O75462 422 aa12.9□□□□□ -0.34
GABARAPL1-210ENST00000541960 FCER1GP30273 86 aa12.9□□□□□ -0.34
GABARAPL1-210ENST00000541960 SMIM2Q9BVW6 85 aa12.9□□□□□ -0.34
GABARAPL1-210ENST00000541960 TRAV9-2A0A087WT02 112 aa12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 SUMO2P61956 95 aaKnown RBP12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 ZNF705AQ6ZN79 300 aaPredicted RBP12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 TMEM158Q8WZ71 300 aa12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 SMIM17P0DL12 118 aa12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 SUMO4Q6EEV6 95 aa12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 TRPT1Q86TN4 253 aaKnown RBP12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 CLUHP3Q96NS8 147 aa12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 WFDC10AQ9H1F0 79 aa12.89□□□□□ -0.35
GABARAPL1-210ENST00000541960 CRYGDP07320 174 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 IGLL1P15814 213 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 ZNF876PQ49A33 203 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 FAM74A4Q5TZK3 123 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 STHQ8IWL8 128 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 C18orf15Q96N68 181 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 SYT8Q8NBV8 401 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 MIEN1Q9BRT3 115 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 XCL2Q9UBD3 114 aa12.88□□□□□ -0.35
GABARAPL1-210ENST00000541960 C20orf202A1L168 122 aa12.87□□□□□ -0.35
GABARAPL1-210ENST00000541960 LAGE3Q14657 143 aa12.87□□□□□ -0.35
GABARAPL1-210ENST00000541960 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
GABARAPL1-210ENST00000541960 C20orf78Q9BR46 151 aa12.87□□□□□ -0.35
GABARAPL1-210ENST00000541960 hDV102S1A0JD36 115 aa12.87□□□□□ -0.35
GABARAPL1-210ENST00000541960 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
GABARAPL1-210ENST00000541960 LINC00482Q8N8I6 264 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 INSP01308 110 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 SPATA3Q8NHX4 192 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 F8P00451 2351 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 BEAN1Q3B7T3 259 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 LINC01587Q99440 93 aa12.86□□□□□ -0.35
GABARAPL1-210ENST00000541960 NEGR1Q7Z3B1 354 aa12.85□□□□□ -0.35
GABARAPL1-210ENST00000541960 F5H697 171 aa12.85□□□□□ -0.35
GABARAPL1-210ENST00000541960 C11orf72Q8NBR9 251 aa12.85□□□□□ -0.35
GABARAPL1-210ENST00000541960 TRRAPQ9Y4A5 3859 aa12.84□□□□□ -0.35
GABARAPL1-210ENST00000541960 MORN3Q6PF18 240 aaPredicted RBP12.84□□□□□ -0.35
GABARAPL1-210ENST00000541960 C1orf158Q8N1D5 194 aa12.84□□□□□ -0.35
GABARAPL1-210ENST00000541960 PF4P02776 101 aa12.84□□□□□ -0.35
GABARAPL1-210ENST00000541960 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
GABARAPL1-210ENST00000541960 CSTL1Q9H114 145 aa12.84□□□□□ -0.35
GABARAPL1-210ENST00000541960 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.83□□□□□ -0.36
GABARAPL1-210ENST00000541960 GIG44P09565 113 aaPredicted RBP12.83□□□□□ -0.36
GABARAPL1-210ENST00000541960 AZU1P20160 251 aa12.83□□□□□ -0.36
GABARAPL1-210ENST00000541960 ZNF56Q15929 161 aa12.83□□□□□ -0.36
GABARAPL1-210ENST00000541960 TP73-AS1Q9UF72 201 aa12.83□□□□□ -0.36
GABARAPL1-210ENST00000541960 ATRQ13535 2644 aa12.82□□□□□ -0.36
GABARAPL1-210ENST00000541960 M0QY20 66 aa12.82□□□□□ -0.36
GABARAPL1-210ENST00000541960 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
GABARAPL1-210ENST00000541960 LGALS9CQ6DKI2 356 aa12.82□□□□□ -0.36
GABARAPL1-210ENST00000541960 DEFB104AQ8WTQ1 72 aa12.82□□□□□ -0.36
GABARAPL1-210ENST00000541960 NUDT3O95989 172 aa12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 PPP1R17O96001 155 aa12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 POLR2KP53803 58 aaKnown RBP12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 ZNF415Q09FC8 603 aa12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 DKK2Q9UBU2 259 aa12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 M0R2P5 195 aa12.81□□□□□ -0.36
GABARAPL1-210ENST00000541960 IGHV3OR16-12A0A075B7B8 117 aa12.8□□□□□ -0.36
GABARAPL1-210ENST00000541960 EREGO14944 169 aa12.8□□□□□ -0.36
GABARAPL1-210ENST00000541960 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
GABARAPL1-210ENST00000541960 UQCR10Q9UDW1 63 aa12.8□□□□□ -0.36
GABARAPL1-210ENST00000541960 GOLT1BQ9Y3E0 138 aa12.8□□□□□ -0.36
GABARAPL1-210ENST00000541960 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
GABARAPL1-210ENST00000541960 TEP1Q99973 2627 aaKnown RBP12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 IGHV3-73A0A0B4J1V6 119 aa12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 UFSP1Q6NVU6 142 aa12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 RPL32P62910 135 aaKnown RBP12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 ORMDL2Q53FV1 153 aa12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 SNHG12Q9BXW3 62 aa12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 NACAE9PAV3 2078 aa12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 CMC4P56277 68 aaPredicted RBP12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 TMEM208Q9BTX3 173 aa12.79□□□□□ -0.36
GABARAPL1-210ENST00000541960 TRBV6-5A0A0K0K1A5 114 aa12.78□□□□□ -0.36
GABARAPL1-210ENST00000541960 SDHAF1A6NFY7 115 aa12.78□□□□□ -0.36
GABARAPL1-210ENST00000541960 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
GABARAPL1-210ENST00000541960 ODF1Q14990 250 aa12.78□□□□□ -0.36
GABARAPL1-210ENST00000541960 G0S2P27469 103 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms