RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NTF3P20783 257 aa10.8□□□□□ -0.68
DDB1-218ENST00000540784 FOXA3P55318 350 aaPredicted RBP10.8□□□□□ -0.68
DDB1-218ENST00000540784 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
DDB1-218ENST00000540784 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
DDB1-218ENST00000540784 PRADC1Q9BSG0 188 aa10.8□□□□□ -0.68
DDB1-218ENST00000540784 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
DDB1-218ENST00000540784 V9GYV3 84 aa10.8□□□□□ -0.68
DDB1-218ENST00000540784 PLECQ15149 4684 aaKnown RBP10.79□□□□□ -0.68
DDB1-218ENST00000540784 A0A096LPF7 62 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 F8W036 122 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 SMIM17P0DL12 118 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 GYPEP15421 78 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 CTRLP40313 264 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 PNRC1Q12796 327 aaPredicted RBP10.79□□□□□ -0.68
DDB1-218ENST00000540784 TWIST1Q15672 202 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 MRPL23Q16540 153 aaKnown RBP10.79□□□□□ -0.68
DDB1-218ENST00000540784 UFSP1Q6NVU6 142 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 Q6ZSN1 163 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 C14orf178Q8N769 122 aaPredicted RBP10.79□□□□□ -0.68
DDB1-218ENST00000540784 LINC00476Q8WZB0 136 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 PGLYRP4Q96LB8 373 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 GFRA4Q9GZZ7 299 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 MSRB1Q9NZV6 116 aa10.79□□□□□ -0.68
DDB1-218ENST00000540784 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
DDB1-218ENST00000540784 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 CCL18P55774 89 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 RAB4BP61018 213 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 RHOHQ15669 191 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 RNF212Q495C1 297 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 UBE2DNLQ8IWF7 75 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 AP1S3Q96PC3 154 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 CNFNQ9BYD5 112 aa10.77□□□□□ -0.69
DDB1-218ENST00000540784 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 F5H697 171 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 K7EQD1 137 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 PPP1R2P9O14990 202 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 SRIP30626 198 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 KIF25-AS1Q9Y6Z4 181 aa10.76□□□□□ -0.69
DDB1-218ENST00000540784 LOC100131303A0A0U1RQF7 123 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 MT-ND4LP03901 98 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 ESRGQ1W209 222 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 SMIM15Q7Z3B0 74 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 NEGR1Q7Z3B1 354 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 SH2D6Q7Z4S9 175 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 NAT8BQ9UHF3 227 aa10.75□□□□□ -0.69
DDB1-218ENST00000540784 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
DDB1-218ENST00000540784 SMIM27A0A1W2PRY6 76 aa10.74□□□□□ -0.69
DDB1-218ENST00000540784 EVI2AP22794 236 aa10.74□□□□□ -0.69
DDB1-218ENST00000540784 ZNF56Q15929 161 aa10.74□□□□□ -0.69
DDB1-218ENST00000540784 NUP35Q8NFH5 326 aa10.74□□□□□ -0.69
DDB1-218ENST00000540784 ADCYAP1P18509 176 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 LINC00315P59091 139 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 RIGQ13278 110 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 LYPD5Q6UWN5 251 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 ANAPC16Q96DE5 110 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 DPH3P1Q9H4G8 78 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 LINC00588Q9Y4M8 146 aa10.73□□□□□ -0.69
DDB1-218ENST00000540784 NACAE9PAV3 2078 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 GAGE12JA6NER3 117 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 MGPP08493 103 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 FAM3BP58499 235 aaPredicted RBP10.72□□□□□ -0.69
DDB1-218ENST00000540784 GAGE1Q13065 139 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 GAGE4Q13068 117 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 GAGE5Q13069 117 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 GAGE13Q4V321 117 aa10.72□□□□□ -0.69
DDB1-218ENST00000540784 TRBV10-1A0A0K0K1A3 114 aa10.71□□□□□ -0.69
DDB1-218ENST00000540784 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
DDB1-218ENST00000540784 Q9UF83 564 aa10.71□□□□□ -0.69
DDB1-218ENST00000540784 RPL36AP83881 106 aaKnown RBP10.7□□□□□ -0.7
DDB1-218ENST00000540784 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
DDB1-218ENST00000540784 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
DDB1-218ENST00000540784 RPL36ALQ969Q0 106 aaKnown RBP10.7□□□□□ -0.7
DDB1-218ENST00000540784 ALMS1Q8TCU4 4167 aa10.69□□□□□ -0.7
DDB1-218ENST00000540784 H7C1H1 209 aa10.69□□□□□ -0.7
DDB1-218ENST00000540784 MRPS16Q9Y3D3 137 aaKnown RBP10.69□□□□□ -0.7
DDB1-218ENST00000540784 DNAH1Q9P2D7 4330 aa10.69□□□□□ -0.7
DDB1-218ENST00000540784 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
DDB1-218ENST00000540784 M0QY20 66 aa10.68□□□□□ -0.7
DDB1-218ENST00000540784 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
DDB1-218ENST00000540784 CTDSP1Q9GZU7 261 aa10.68□□□□□ -0.7
DDB1-218ENST00000540784 CARHSP1Q9Y2V2 147 aaKnown RBP10.68□□□□□ -0.7
DDB1-218ENST00000540784 KMT2CQ8NEZ4 4911 aaKnown RBP10.68□□□□□ -0.7
DDB1-218ENST00000540784 A0A1B0GW15 77 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 TIRAPP58753 221 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 LYSTQ99698 3801 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 Q9H8V8 135 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
DDB1-218ENST00000540784 VPS13DQ5THJ4 4388 aa10.66□□□□□ -0.7
DDB1-218ENST00000540784 CAMPP49913 170 aa10.66□□□□□ -0.7
DDB1-218ENST00000540784 RASL11AQ6T310 242 aa10.66□□□□□ -0.7
DDB1-218ENST00000540784 NEXN-AS1Q8NBZ9 246 aa10.66□□□□□ -0.7
DDB1-218ENST00000540784 DNAJC30Q96LL9 226 aa10.66□□□□□ -0.7
DDB1-218ENST00000540784 UPK3BQ9BT76 320 aa10.66□□□□□ -0.7
DDB1-218ENST00000540784 IGLV2-18A0A075B6J9 118 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 C7orf77A4D0Y5 90 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 S100A8P05109 93 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms