RNA–Protein interactions for RNA: ENST00000540738.3

COLCA1-204, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,537 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-204ENST00000540738 AMTNQ6UX39 209 aa10.86□□□□□ -0.67
COLCA1-204ENST00000540738 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
COLCA1-204ENST00000540738 WNK1Q9H4A3 2382 aa10.86□□□□□ -0.67
COLCA1-204ENST00000540738 C3orf79P0CE67 100 aa10.85□□□□□ -0.67
COLCA1-204ENST00000540738 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
COLCA1-204ENST00000540738 ODF3Q96PU9 254 aa10.85□□□□□ -0.67
COLCA1-204ENST00000540738 NXPH4O95158 308 aa10.85□□□□□ -0.67
COLCA1-204ENST00000540738 HIST3H2BBQ8N257 126 aa10.85□□□□□ -0.67
COLCA1-204ENST00000540738 TRBV7-3A0A075B6L6 115 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 CAMK2N2Q96S95 79 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 BBC3Q96PG8 261 aaPredicted RBP10.84□□□□□ -0.67
COLCA1-204ENST00000540738 NDUFA12Q9UI09 145 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 MIFP14174 115 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 K7EQG2 157 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 C14orf177Q52M58 125 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
COLCA1-204ENST00000540738 LINC00518Q8N0U6 118 aa10.83□□□□□ -0.67
COLCA1-204ENST00000540738 ANKRD11Q6UB99 2663 aaPredicted RBP10.83□□□□□ -0.68
COLCA1-204ENST00000540738 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 SUMO4Q6EEV6 95 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 TRAV4A0A0B4J268 109 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 H3BUT2 72 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 FAM167A-AS1Q96KT0 104 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 COX7A2LO14548 114 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 TNCP24821 2201 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 SNHG12Q9BXW3 62 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 MRPL36Q9P0J6 103 aaKnown RBP10.83□□□□□ -0.68
COLCA1-204ENST00000540738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.83□□□□□ -0.68
COLCA1-204ENST00000540738 IGKV2-29A2NJV5 120 aaPredicted RBP10.83□□□□□ -0.68
COLCA1-204ENST00000540738 IGLC2P0DOY2 106 aa10.83□□□□□ -0.68
COLCA1-204ENST00000540738 ARHGAP21Q5T5U3 1957 aa10.82□□□□□ -0.68
COLCA1-204ENST00000540738 CRYGBP07316 175 aa10.82□□□□□ -0.68
COLCA1-204ENST00000540738 PSMB8P28062 276 aa10.82□□□□□ -0.68
COLCA1-204ENST00000540738 ZNF295-AS1Q8N0V1 137 aa10.82□□□□□ -0.68
COLCA1-204ENST00000540738 TRBV10-1A0A0K0K1A3 114 aa10.82□□□□□ -0.68
COLCA1-204ENST00000540738 COX11Q9Y6N1 276 aa10.82□□□□□ -0.68
COLCA1-204ENST00000540738 MORN5Q5VZ52 161 aa10.81□□□□□ -0.68
COLCA1-204ENST00000540738 C15orf53Q8NAA6 179 aa10.81□□□□□ -0.68
COLCA1-204ENST00000540738 PRR14LQ5THK1 2151 aa10.81□□□□□ -0.68
COLCA1-204ENST00000540738 F8VRH5 84 aa10.81□□□□□ -0.68
COLCA1-204ENST00000540738 PROP1O75360 226 aa10.81□□□□□ -0.68
COLCA1-204ENST00000540738 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
COLCA1-204ENST00000540738 DEFB131BA0A096LNP1 70 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 SMR3AQ99954 134 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 C9JQL5 133 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 P0C879 139 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 KMT2EQ8IZD2 1858 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 TRBV6-1A0A0K0K1D8 114 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 Q8N6K4 173 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
COLCA1-204ENST00000540738 RPL18AQ02543 176 aaKnown RBP10.8□□□□□ -0.68
COLCA1-204ENST00000540738 SPTBN4Q9H254 2564 aa10.79□□□□□ -0.68
COLCA1-204ENST00000540738 TTC32Q5I0X7 151 aa10.79□□□□□ -0.68
COLCA1-204ENST00000540738 TIRAPP58753 221 aa10.79□□□□□ -0.68
COLCA1-204ENST00000540738 FAM222AQ5U5X8 452 aa10.79□□□□□ -0.68
COLCA1-204ENST00000540738 VSIG2Q96IQ7 327 aa10.78□□□□□ -0.68
COLCA1-204ENST00000540738 TRAV10A0A0B4J240 114 aa10.78□□□□□ -0.68
COLCA1-204ENST00000540738 ADCYAP1P18509 176 aa10.78□□□□□ -0.68
COLCA1-204ENST00000540738 HERV-K104P63124 156 aa10.78□□□□□ -0.68
COLCA1-204ENST00000540738 C5orf38Q86SI9 138 aa10.78□□□□□ -0.68
COLCA1-204ENST00000540738 IGLV10-54A0A075B6I4 117 aa10.77□□□□□ -0.68
COLCA1-204ENST00000540738 K7EN84 100 aa10.77□□□□□ -0.68
COLCA1-204ENST00000540738 LGALS9BQ3B8N2 356 aa10.77□□□□□ -0.68
COLCA1-204ENST00000540738 RNASE13Q5GAN3 156 aaKnown RBP10.77□□□□□ -0.68
COLCA1-204ENST00000540738 LGALS9CQ6DKI2 356 aa10.77□□□□□ -0.68
COLCA1-204ENST00000540738 SPINK8P0C7L1 97 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 NDUFA1O15239 70 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 KIR2DL5BA0A0G2JN68 375 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 KIR2DL5BA0A0G2JPC4 375 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 TAL2Q16559 108 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 KIR2DL5AQ8N109 375 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 KIR2DL5BQ8NHK3 375 aa10.77□□□□□ -0.69
COLCA1-204ENST00000540738 IGKV1D-37A0A075B6S9 117 aa10.76□□□□□ -0.69
COLCA1-204ENST00000540738 KLK12Q9UKR0 248 aa10.76□□□□□ -0.69
COLCA1-204ENST00000540738 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
COLCA1-204ENST00000540738 UTF1Q5T230 341 aa10.76□□□□□ -0.69
COLCA1-204ENST00000540738 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
COLCA1-204ENST00000540738 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 MRPL35Q9NZE8 188 aaKnown RBP10.75□□□□□ -0.69
COLCA1-204ENST00000540738 JMJD1CQ15652 2540 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 TRAV26-1A0A087WT03 109 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 DEFB1P60022 68 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 SAMD5Q5TGI4 173 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 C10orf99Q6UWK7 81 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 MYO9AB2RTY4 2548 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 J3QQQ9 107 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 FGF6P10767 208 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 AVPP01185 164 aa10.75□□□□□ -0.69
COLCA1-204ENST00000540738 PCNX3Q9H6A9 2034 aa10.74□□□□□ -0.69
COLCA1-204ENST00000540738 IGLV1-40P01703 118 aa10.74□□□□□ -0.69
COLCA1-204ENST00000540738 STPG4Q8N801 248 aa10.74□□□□□ -0.69
COLCA1-204ENST00000540738 ZFYVE26Q68DK2 2539 aa10.74□□□□□ -0.69
COLCA1-204ENST00000540738 RPL39LQ96EH5 51 aaKnown RBP10.74□□□□□ -0.69
COLCA1-204ENST00000540738 CXCL5P42830 114 aa10.74□□□□□ -0.69
COLCA1-204ENST00000540738 ZFP2Q6ZN57 461 aa10.73□□□□□ -0.69
COLCA1-204ENST00000540738 LYPD6BQ8NI32 183 aa10.73□□□□□ -0.69
COLCA1-204ENST00000540738 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
COLCA1-204ENST00000540738 BRWD1-AS2P59051 145 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms