RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 M0R036 132 aa9.33□□□□□ -0.92
SNHG1-213ENST00000540725 GIPP09681 153 aaPredicted RBP9.33□□□□□ -0.92
SNHG1-213ENST00000540725 ARMS2P0C7Q2 107 aa9.33□□□□□ -0.92
SNHG1-213ENST00000540725 DNLZQ5SXM8 178 aa9.33□□□□□ -0.92
SNHG1-213ENST00000540725 SYT8Q8NBV8 401 aa9.33□□□□□ -0.92
SNHG1-213ENST00000540725 HIST1H2BAQ96A08 127 aa9.33□□□□□ -0.92
SNHG1-213ENST00000540725 ZC2HC1AQ96GY0 325 aa9.33□□□□□ -0.92
SNHG1-213ENST00000540725 FXYD6-FXYD2A0A087WZ82 144 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 GRIFINA4D1Z8 144 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 SH2D1AO60880 128 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 CRIP1P50238 77 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 FAM74A4Q5TZK3 123 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 C9orf62Q8N4C0 152 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 OR11H4Q8NGC9 324 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 NKX6-2Q9C056 277 aaPredicted RBP9.32□□□□□ -0.92
SNHG1-213ENST00000540725 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
SNHG1-213ENST00000540725 PLA2G1BP04054 148 aaKnown RBP9.31□□□□□ -0.92
SNHG1-213ENST00000540725 AKR1C8PQ5T2L2 129 aa9.31□□□□□ -0.92
SNHG1-213ENST00000540725 COX8CQ7Z4L0 72 aa9.31□□□□□ -0.92
SNHG1-213ENST00000540725 NIT1Q86X76 327 aa9.31□□□□□ -0.92
SNHG1-213ENST00000540725 RMI2Q96E14 147 aa9.31□□□□□ -0.92
SNHG1-213ENST00000540725 ZFP30Q9Y2G7 519 aa9.31□□□□□ -0.92
SNHG1-213ENST00000540725 URGCP-MRPS24S4R325 110 aa9.31□□□□□ -0.92
SNHG1-213ENST00000540725 A0A087WWL8 130 aa9.3□□□□□ -0.92
SNHG1-213ENST00000540725 J3QL48 77 aa9.3□□□□□ -0.92
SNHG1-213ENST00000540725 FAM162BQ5T6X4 162 aa9.3□□□□□ -0.92
SNHG1-213ENST00000540725 LINC00528Q8N1L1 170 aa9.3□□□□□ -0.92
SNHG1-213ENST00000540725 SFRP2Q96HF1 295 aa9.3□□□□□ -0.92
SNHG1-213ENST00000540725 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
SNHG1-213ENST00000540725 MAP1LC3B2A6NCE7 125 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 SEC11BP0C7V7 166 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 TPT1P13693 172 aaKnown RBP9.29□□□□□ -0.92
SNHG1-213ENST00000540725 UBE2G1P62253 170 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 FMC1Q96HJ9 113 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 DNAJC30Q96LL9 226 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 MAP1LC3BQ9GZQ8 125 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 KLK12Q9UKR0 248 aa9.29□□□□□ -0.92
SNHG1-213ENST00000540725 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
SNHG1-213ENST00000540725 TMSB15BA0A087X1C1 80 aa9.28□□□□□ -0.92
SNHG1-213ENST00000540725 M0R381 172 aa9.28□□□□□ -0.92
SNHG1-213ENST00000540725 LINC01559Q495D7 138 aa9.28□□□□□ -0.92
SNHG1-213ENST00000540725 SLC7A5P1Q8MH63 180 aa9.28□□□□□ -0.92
SNHG1-213ENST00000540725 Q8N976 141 aa9.28□□□□□ -0.92
SNHG1-213ENST00000540725 A0A087WX48 190 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 RBFOX3A6NFN3 312 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 HMSDA8MTL9 139 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 G3V3Q6 166 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 ZNF674Q2M3X9 581 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 ZFP82Q8N141 532 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 UBE2WQ96B02 151 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 CHCHD7Q9BUK0 85 aa9.27□□□□□ -0.93
SNHG1-213ENST00000540725 TRBV10-1A0A0K0K1A3 114 aa9.26□□□□□ -0.93
SNHG1-213ENST00000540725 TRBV6-1A0A0K0K1D8 114 aa9.26□□□□□ -0.93
SNHG1-213ENST00000540725 LTAP01374 205 aa9.26□□□□□ -0.93
SNHG1-213ENST00000540725 RPL36AP83881 106 aaKnown RBP9.26□□□□□ -0.93
SNHG1-213ENST00000540725 SCXQ7RTU7 201 aa9.26□□□□□ -0.93
SNHG1-213ENST00000540725 RPL36ALQ969Q0 106 aaKnown RBP9.26□□□□□ -0.93
SNHG1-213ENST00000540725 TCEAL7Q9BRU2 100 aa9.26□□□□□ -0.93
SNHG1-213ENST00000540725 SMLR1H3BR10 107 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 AKR1C3P42330 323 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 FHITP49789 147 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 UBE2D3P61077 147 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 UBE2D2P62837 147 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 ELOBQ15370 118 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 KCNIP4Q6PIL6 250 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 TEX261Q6UWH6 196 aa9.25□□□□□ -0.93
SNHG1-213ENST00000540725 TRBV7-3A0A075B6L6 115 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 STOML3Q8TAV4 291 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 DEFB104AQ8WTQ1 72 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 CYTL1Q9NRR1 136 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 LRP1Q07954 4544 aaKnown RBP9.24□□□□□ -0.93
SNHG1-213ENST00000540725 KRTAP29-1A8MX34 341 aaPredicted RBP9.24□□□□□ -0.93
SNHG1-213ENST00000540725 ARPC5O15511 151 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 OR10G8Q8NGN5 311 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 CHAC1Q9BUX1 264 aa9.24□□□□□ -0.93
SNHG1-213ENST00000540725 LINC00862A6NCI5 91 aa9.23□□□□□ -0.93
SNHG1-213ENST00000540725 Q0VG73 95 aa9.23□□□□□ -0.93
SNHG1-213ENST00000540725 TRBV6-8A0A0A6YYG3 113 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 TMEM262E9PQX1 116 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 PAGE4O60829 102 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 RAB4BP61018 213 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 RPL19P84098 196 aaKnown RBP9.22□□□□□ -0.93
SNHG1-213ENST00000540725 ZNF56Q15929 161 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 CLLU1Q5K131 121 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 NEXN-AS1Q8NBZ9 246 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 OR10AG1Q8NH19 301 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
SNHG1-213ENST00000540725 CRPP02741 224 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 CXCL1P09341 107 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 C14orf177Q52M58 125 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 PRR27Q6MZM9 219 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 C15orf54Q8N8G6 183 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
SNHG1-213ENST00000540725 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
SNHG1-213ENST00000540725 S100A9P06702 114 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms