RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SLC48A1Q6P1K1 146 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 NDUFA11Q86Y39 141 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 C20orf197Q8N268 126 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 C1orf54Q8WWF1 131 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 AGPAT4-IT1Q9H0P7 198 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 TMEM14BQ9NUH8 114 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 V9GYV3 84 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 CITO14578 2027 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 CPDO75976 1380 aa0.41□□□□□ -2.34
MDM2-227ENST00000540709 CDK12Q9NYV4 1490 aaPredicted RBP0.41□□□□□ -2.34
MDM2-227ENST00000540709 MUC4Q99102 2169 aa0.4□□□□□ -2.34
MDM2-227ENST00000540709 ZGRF1Q86YA3 2104 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 A0A1B0GV90 55 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 F2Z2F3 143 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 PITX3O75364 302 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 AKAIN1P0CW23 69 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 NPC2P61916 151 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 DEFB132Q7Z7B7 95 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.4□□□□□ -2.35
MDM2-227ENST00000540709 COX7B2Q8TF08 81 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 C10orf82Q8WW14 230 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 RERGLQ9H628 205 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 NAA60Q9H7X0 242 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 VIRMAQ69YN4 1812 aaKnown RBP0.4□□□□□ -2.35
MDM2-227ENST00000540709 CASZ1Q86V15 1759 aa0.4□□□□□ -2.35
MDM2-227ENST00000540709 NAIPQ13075 1403 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 ATG2AQ2TAZ0 1938 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 MYH13Q9UKX3 1938 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 TRBV7-1A0A0A6YYK4 115 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 MIF4GDA9UHW6 222 aaKnown RBP0.39□□□□□ -2.35
MDM2-227ENST00000540709 IFNGP01579 166 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 S100A1P23297 94 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 C10orf99Q6UWK7 81 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 KRTAP19-3Q7Z4W3 81 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 AQP10Q96PS8 301 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 GNG8Q9UK08 70 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 SERP1Q9Y6X1 66 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 ROCK2O75116 1388 aaKnown RBP0.39□□□□□ -2.35
MDM2-227ENST00000540709 TMEM2Q9UHN6 1383 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 CTTNBP2Q8WZ74 1663 aa0.39□□□□□ -2.35
MDM2-227ENST00000540709 LAMA4Q16363 1823 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 SPTBP11277 2137 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 TRBV10-3A0A0K0K1G6 114 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 MCRIP1C9JLW8 97 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 K7EIL1 84 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 APOC4-APOC2K7ER74 178 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 DLEU1O43261 78 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 APOC2P02655 101 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 APODP05090 189 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 ACYP2P14621 99 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 CCL3L1P16619 93 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 RPL37P61927 97 aaKnown RBP0.38□□□□□ -2.35
MDM2-227ENST00000540709 CATR1Q13166 79 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 Q56UQ5 140 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 C10orf128Q5T292 105 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 MRPL54Q6P161 138 aaKnown RBP0.38□□□□□ -2.35
MDM2-227ENST00000540709 PPP3R2Q96LZ3 170 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 PRR15LQ9BU68 103 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 SNRNP25Q9BV90 132 aaKnown RBP0.38□□□□□ -2.35
MDM2-227ENST00000540709 LINC00312Q9Y6C7 94 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 MYH6P13533 1939 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 KIF13AQ9H1H9 1805 aa0.38□□□□□ -2.35
MDM2-227ENST00000540709 BLMP54132 1417 aaPredicted RBP0.38□□□□□ -2.35
MDM2-227ENST00000540709 RREB1Q92766 1687 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 ASCC3Q8N3C0 2202 aaKnown RBP0.37□□□□□ -2.35
MDM2-227ENST00000540709 BICRAQ9NZM4 1560 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 AFDNP55196 1824 aaKnown RBP0.37□□□□□ -2.35
MDM2-227ENST00000540709 TRAV13-2A0A0B4J235 113 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 LOC100130705A0A1B0GUX0 176 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 HCG22E2RYF7 251 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 F6UZH7 168 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 FGF7P21781 194 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 EDDM3BP56851 147 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 SPINK7P58062 85 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 TPPP2P59282 170 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 CCL8P80075 99 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 INSL4Q14641 139 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 C9orf153Q5TBE3 101 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 C12orf73Q69YU5 71 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 ZNF818PQ6ZRF7 136 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 PP6455Q8WZ26 134 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 LSM10Q969L4 123 aaKnown RBP0.37□□□□□ -2.35
MDM2-227ENST00000540709 NPVFQ9HCQ7 196 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 SCN3BQ9NY72 215 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 SCP2D1Q9UJQ7 156 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 BCORL1Q5H9F3 1711 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 DAPK1P53355 1430 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 LOC285556D6RIA3 1793 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 DLEC1Q9Y238 1755 aa0.37□□□□□ -2.35
MDM2-227ENST00000540709 SPEF2Q9C093 1822 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 PTPRMP28827 1452 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 GRIN2AQ12879 1464 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 ZNF518AQ6AHZ1 1483 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 AHNAKQ09666 5890 aaKnown RBP0.36□□□□□ -2.35
MDM2-227ENST00000540709 WDR97A6NE52 1622 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 TRGV1A0A0A0MS02 117 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 A0A0D9SG42 100 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 FAM24AA6NFZ4 105 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 SIX6O95475 246 aa0.36□□□□□ -2.35
MDM2-227ENST00000540709 PPP1R17O96001 155 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms