RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 IGHV3-30-5P0DP03 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 UBE2G1P62253 170 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 GAGE1Q13065 139 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 GAGE4Q13068 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 GAGE5Q13069 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
SEMA4D-223ENST00000540475 TRAV8-3A0A0A6YYJ7 113 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 A0A0D9SG52 128 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 TRBV10-1A0A0K0K1A3 114 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 GRIFINA4D1Z8 144 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 M0R036 132 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 PAGE4O60829 102 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 CST9LP1Q5W188 147 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 Q8N3U1 123 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 TM2D2Q9BX73 214 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 PHLDA3Q9Y5J5 127 aa8.71□□□□□ -1.02
SEMA4D-223ENST00000540475 C1QBP02746 253 aa8.7□□□□□ -1.02
SEMA4D-223ENST00000540475 TPT1P13693 172 aaKnown RBP8.7□□□□□ -1.02
SEMA4D-223ENST00000540475 ZFP82Q8N141 532 aa8.7□□□□□ -1.02
SEMA4D-223ENST00000540475 SFT2D1Q8WV19 159 aa8.7□□□□□ -1.02
SEMA4D-223ENST00000540475 SSBP4Q9BWG4 385 aaPredicted RBP8.7□□□□□ -1.02
SEMA4D-223ENST00000540475 Q9HAA7 133 aa8.7□□□□□ -1.02
SEMA4D-223ENST00000540475 IGLV5-52A0A0A0MRZ9 124 aa8.69□□□□□ -1.02
SEMA4D-223ENST00000540475 BCL2L11O43521 198 aa8.69□□□□□ -1.02
SEMA4D-223ENST00000540475 AKR1C3P42330 323 aa8.69□□□□□ -1.02
SEMA4D-223ENST00000540475 OR10G8Q8NGN5 311 aa8.69□□□□□ -1.02
SEMA4D-223ENST00000540475 SNAI2O43623 268 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 UBE2D3P61077 147 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 UBE2D2P62837 147 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 TOR2AQ5JU69 321 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 DAZ4Q86SG3 579 aaKnown RBP8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 NIT1Q86X76 327 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 FAM213BQ8TBF2 198 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 DAZ3Q9NR90 486 aaKnown RBP8.68□□□□□ -1.02
SEMA4D-223ENST00000540475 TRBV7-3A0A075B6L6 115 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 A0A087WWL8 130 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 TMSB15BA0A087X1C1 80 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 KANTRA0A1W2PQU2 76 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 M0R381 172 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 RAB4BP61018 213 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 WFDC2Q14508 124 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 FAM74A4Q5TZK3 123 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 Q5VSD8 79 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 PRR27Q6MZM9 219 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 FRZBQ92765 325 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 ZNF471Q9BX82 626 aaPredicted RBP8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 COX11Q9Y6N1 276 aa8.67□□□□□ -1.02
SEMA4D-223ENST00000540475 TRAV1-1A0A0B4J248 108 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 H2AFB1P0C5Y9 115 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 OR5AL1P0C617 328 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 EIF5AP63241 154 aaKnown RBP8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 ATRAIDQ6UW56 229 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 Q6ZSA8 131 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 TMUB2Q71RG4 321 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 BAGE2Q86Y30 109 aa8.66□□□□□ -1.02
SEMA4D-223ENST00000540475 PFDN1O60925 122 aa8.65□□□□□ -1.02
SEMA4D-223ENST00000540475 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
SEMA4D-223ENST00000540475 RPL36AP83881 106 aaKnown RBP8.65□□□□□ -1.02
SEMA4D-223ENST00000540475 RPL36ALQ969Q0 106 aaKnown RBP8.65□□□□□ -1.02
SEMA4D-223ENST00000540475 C11orf52Q96A22 123 aa8.65□□□□□ -1.02
SEMA4D-223ENST00000540475 FAM30AQ9NZY2 134 aa8.65□□□□□ -1.02
SEMA4D-223ENST00000540475 RPL19P84098 196 aaKnown RBP8.64□□□□□ -1.03
SEMA4D-223ENST00000540475 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
SEMA4D-223ENST00000540475 KIF25-AS1Q9Y6Z4 181 aa8.64□□□□□ -1.03
SEMA4D-223ENST00000540475 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 RPL35P42766 123 aaKnown RBP8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 RAB5CP51148 216 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 CCL20P78556 96 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 ELOBQ15370 118 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 NEXN-AS1Q8NBZ9 246 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 RMI2Q96E14 147 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 MANBALQ9NQG1 85 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 URGCP-MRPS24S4R325 110 aa8.63□□□□□ -1.03
SEMA4D-223ENST00000540475 TRBV6-8A0A0A6YYG3 113 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 A0A1B0GV50 99 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 FAM229AH3BQW9 127 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 IGLV2-8P01709 118 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 SMIM12Q96EX1 92 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 DNAJC30Q96LL9 226 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 VAX2Q9UIW0 290 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
SEMA4D-223ENST00000540475 A0A087WX48 190 aa8.61□□□□□ -1.03
SEMA4D-223ENST00000540475 Q8N976 141 aa8.61□□□□□ -1.03
SEMA4D-223ENST00000540475 BAALCQ8WXS3 180 aa8.61□□□□□ -1.03
SEMA4D-223ENST00000540475 DERL1Q9BUN8 251 aa8.61□□□□□ -1.03
SEMA4D-223ENST00000540475 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
SEMA4D-223ENST00000540475 C19orf71A6NCJ1 209 aa8.6□□□□□ -1.03
SEMA4D-223ENST00000540475 IGLC6P0CF74 106 aa8.6□□□□□ -1.03
SEMA4D-223ENST00000540475 SULT1A2P50226 295 aa8.6□□□□□ -1.03
SEMA4D-223ENST00000540475 Q0VG73 95 aa8.6□□□□□ -1.03
SEMA4D-223ENST00000540475 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
SEMA4D-223ENST00000540475 EIF5AL1Q6IS14 154 aaKnown RBP8.6□□□□□ -1.03
SEMA4D-223ENST00000540475 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
SEMA4D-223ENST00000540475 IGKV2D-24A0A075B6R9 120 aa8.59□□□□□ -1.03
SEMA4D-223ENST00000540475 LECT2O14960 151 aa8.59□□□□□ -1.03
SEMA4D-223ENST00000540475 HAMPP81172 84 aa8.59□□□□□ -1.03
SEMA4D-223ENST00000540475 ZNF56Q15929 161 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms