RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 COX6A2Q02221 97 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 SRSF9Q13242 221 aaKnown RBP eCLIP4.95□□□□□ -1.62
LRP6-204ENST00000540415 KHDC3LQ587J8 217 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 SPINK6Q6UWN8 80 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 PRSS3P2Q8NHM4 247 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 CHCHD5Q9BSY4 110 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 PRR34Q9NV39 138 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 PSG8Q9UQ74 426 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 MUC17Q685J3 4493 aa4.95□□□□□ -1.62
LRP6-204ENST00000540415 GRIFINA4D1Z8 144 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 NAP1L6A6NFF2 107 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 TCRBP04435 133 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 RAB5CP51148 216 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 RBX1P62877 108 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 GAGE6Q13070 117 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 SMUG1Q53HV7 270 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 NTM-AS1Q6ZSK4 140 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 PRNTQ86SH4 94 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 STPG4Q8N801 248 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 CLRN3Q8NCR9 226 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 NDFIP1Q9BT67 221 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 OR5AC2Q9NZP5 309 aa4.94□□□□□ -1.62
LRP6-204ENST00000540415 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 TRBV7-3A0A075B6L6 115 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 RHODO00212 210 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 TCRAP04437 139 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 TMBIM6P55061 237 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 RPL36AP83881 106 aaKnown RBP4.93□□□□□ -1.62
LRP6-204ENST00000540415 FAM74A1Q5RGS3 127 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 PIK3CD-AS1Q5SR53 167 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 NEXN-AS1Q8NBZ9 246 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 RPL36ALQ969Q0 106 aaKnown RBP4.93□□□□□ -1.62
LRP6-204ENST00000540415 SFRP2Q96HF1 295 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 SDHCQ99643 169 aaPredicted RBP4.93□□□□□ -1.62
LRP6-204ENST00000540415 MRPS26Q9BYN8 205 aaKnown RBP4.93□□□□□ -1.62
LRP6-204ENST00000540415 GFRA4Q9GZZ7 299 aa4.93□□□□□ -1.62
LRP6-204ENST00000540415 TRAV6A0A075B6T7 132 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.92□□□□□ -1.62
LRP6-204ENST00000540415 TRAV34A0A0B4J273 112 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 TRBV10-1A0A0K0K1A3 114 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 H0YIZ8 118 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 H7C1H1 209 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 M0R036 132 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 M0R381 172 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 TAS2R45P59539 299 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 FLI1Q01543 452 aaPredicted RBP4.92□□□□□ -1.62
LRP6-204ENST00000540415 TRIQKQ629K1 86 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 CFAP161Q6P656 301 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 ARL6IP6Q8N6S5 226 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 OR11H4Q8NGC9 324 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 OR10G8Q8NGN5 311 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 KCNIP2Q9NS61 270 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 AP5S1Q9NUS5 200 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 IL36BQ9NZH7 164 aa4.92□□□□□ -1.62
LRP6-204ENST00000540415 A0A096LNI7 61 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 A0A0U1RQV1 116 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 B4DEV8 164 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 C17orf112F2Z3M2 114 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 SIX6O95475 246 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 CRIP1P50238 77 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 RAB2AP61019 212 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 REG3AQ06141 175 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 ZFP69Q49AA0 526 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 HIGD2BQ4VC39 106 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 C15orf56Q8N910 161 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 VAX2Q9UIW0 290 aa4.91□□□□□ -1.62
LRP6-204ENST00000540415 TMSB15BA0A087X1C1 80 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 KRBOX1C9JBD0 128 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 PLA2G10O15496 165 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 NDUFS6O75380 124 aaKnown RBP4.9□□□□□ -1.63
LRP6-204ENST00000540415 ARL14EPLP0DKL9 152 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 LRRC37A5PQ49AS3 106 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 PRR26Q8N8Z3 221 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 C5orf17Q8NAS9 161 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 C20orf203Q8NBC4 194 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 INO80EQ8NBZ0 244 aaPredicted RBP4.9□□□□□ -1.63
LRP6-204ENST00000540415 SMIM3Q9BZL3 60 aa4.9□□□□□ -1.63
LRP6-204ENST00000540415 IGLV4-60A0A075B6I1 120 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 SERTM2A0A1B0GWG4 89 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 S100A5P33763 92 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 DEFA3P59666 94 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 PRR27Q6MZM9 219 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 PQLC2Q6ZP29 291 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 WFDC1Q9HC57 220 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 NUDT15Q9NV35 164 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 EPDR1Q9UM22 224 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 PHLDA3Q9Y5J5 127 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 ARL2-SNX15V9GYD0 113 aa4.89□□□□□ -1.63
LRP6-204ENST00000540415 CENPXA8MT69 81 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 FABP5P3A8MUU1 101 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 SH2D1AO60880 128 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 NOL3O60936 208 aaKnown RBP4.88□□□□□ -1.63
LRP6-204ENST00000540415 IL7P13232 177 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 RPS10P46783 165 aaKnown RBP4.88□□□□□ -1.63
LRP6-204ENST00000540415 SUMO1P63165 101 aaKnown RBP4.88□□□□□ -1.63
LRP6-204ENST00000540415 ZNF56Q15929 161 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 PRR4Q16378 134 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 DNLZQ5SXM8 178 aa4.88□□□□□ -1.63
LRP6-204ENST00000540415 MZT2BQ6NZ67 158 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms