RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 ACTR3CQ9C0K3 210 aaPredicted RBP8.14□□□□□ -1.11
COPS7A-211ENST00000540408 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
COPS7A-211ENST00000540408 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
COPS7A-211ENST00000540408 TRBV10-1A0A0K0K1A3 114 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 A0A1W2PRE2 83 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 H3BVH4 76 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 CRPP02741 224 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 ARMS2P0C7Q2 107 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 ATRAIDQ6UW56 229 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.13□□□□□ -1.11
COPS7A-211ENST00000540408 DNAJC30Q96LL9 226 aa8.13□□□□□ -1.11
COPS7A-211ENST00000540408 TRAV34A0A0B4J273 112 aa8.12□□□□□ -1.11
COPS7A-211ENST00000540408 TPT1P13693 172 aaKnown RBP8.12□□□□□ -1.11
COPS7A-211ENST00000540408 DNLZQ5SXM8 178 aa8.12□□□□□ -1.11
COPS7A-211ENST00000540408 SFRP2Q96HF1 295 aa8.12□□□□□ -1.11
COPS7A-211ENST00000540408 TNFSF18Q9UNG2 199 aa8.12□□□□□ -1.11
COPS7A-211ENST00000540408 TRBV7-3A0A075B6L6 115 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 A0A087WWL8 130 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 KRBOX1C9JBD0 128 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 M0R036 132 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 M0R381 172 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 ATP6V0CP27449 155 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 DEFA1P59665 94 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 DEFA3P59666 94 aa8.11□□□□□ -1.11
COPS7A-211ENST00000540408 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
COPS7A-211ENST00000540408 GRIFINA4D1Z8 144 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 PKIAP61925 76 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 FAM162BQ5T6X4 162 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 DGAT2L7PQ6IED9 249 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 ZFP82Q8N141 532 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 HIST1H2BAQ96A08 127 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 ZFP30Q9Y2G7 519 aa8.1□□□□□ -1.11
COPS7A-211ENST00000540408 TRBV6-8A0A0A6YYG3 113 aa8.09□□□□□ -1.11
COPS7A-211ENST00000540408 PEX7O00628 323 aa8.09□□□□□ -1.11
COPS7A-211ENST00000540408 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
COPS7A-211ENST00000540408 UBE2D3P61077 147 aa8.09□□□□□ -1.11
COPS7A-211ENST00000540408 UBE2D2P62837 147 aa8.09□□□□□ -1.11
COPS7A-211ENST00000540408 ENHOQ6UWT2 76 aa8.09□□□□□ -1.11
COPS7A-211ENST00000540408 C15orf54Q8N8G6 183 aa8.09□□□□□ -1.11
COPS7A-211ENST00000540408 USP17L23D6RBM5 183 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 SH2D1AO60880 128 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 HLA-DQA1P01909 254 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 CRIP1P50238 77 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 UBE2G2P60604 165 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 UBE2G1P62253 170 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 IFITM3Q01628 133 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 MIAQ16674 131 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 Q86TA4 180 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 ZC2HC1AQ96GY0 325 aa8.08□□□□□ -1.12
COPS7A-211ENST00000540408 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
COPS7A-211ENST00000540408 TMSB15BA0A087X1C1 80 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 A0A0D9SG52 128 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 A6NHS1 94 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 RAB4BP61018 213 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 C9orf163Q8N9P6 203 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 OR10G8Q8NGN5 311 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 FMC1Q96HJ9 113 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 AQP10Q96PS8 301 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 CHCHD5Q9BSY4 110 aa8.07□□□□□ -1.12
COPS7A-211ENST00000540408 CTXND1A0A1B0GTU2 59 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 PTTG1O95997 202 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 ZNF56Q15929 161 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 MPV17L2Q567V2 206 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 TMEM97Q5BJF2 176 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
COPS7A-211ENST00000540408 DAZAP1Q96EP5 407 aaKnown RBP8.06□□□□□ -1.12
COPS7A-211ENST00000540408 BORCS7-ASMTA0A0B4J1R7 106 aa8.05□□□□□ -1.12
COPS7A-211ENST00000540408 FAM74A7A6NL05 159 aa8.05□□□□□ -1.12
COPS7A-211ENST00000540408 PRSS1P07477 247 aa8.05□□□□□ -1.12
COPS7A-211ENST00000540408 RPL19P84098 196 aaKnown RBP8.05□□□□□ -1.12
COPS7A-211ENST00000540408 ZNF674Q2M3X9 581 aa8.05□□□□□ -1.12
COPS7A-211ENST00000540408 Q6ZRU5 148 aa8.05□□□□□ -1.12
COPS7A-211ENST00000540408 INO80EQ8NBZ0 244 aaPredicted RBP8.05□□□□□ -1.12
COPS7A-211ENST00000540408 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
COPS7A-211ENST00000540408 HNRNPA3P51991 378 aaKnown RBP8.04□□□□□ -1.12
COPS7A-211ENST00000540408 NEXN-AS1Q8NBZ9 246 aa8.04□□□□□ -1.12
COPS7A-211ENST00000540408 CLRN3Q8NCR9 226 aa8.04□□□□□ -1.12
COPS7A-211ENST00000540408 F5H697 171 aa8.03□□□□□ -1.12
COPS7A-211ENST00000540408 AKR1C8PQ5T2L2 129 aa8.03□□□□□ -1.12
COPS7A-211ENST00000540408 TCEAL7Q9BRU2 100 aa8.03□□□□□ -1.12
COPS7A-211ENST00000540408 ZNF471Q9BX82 626 aaPredicted RBP8.03□□□□□ -1.12
COPS7A-211ENST00000540408 TRBV6-1A0A0K0K1D8 114 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 ZNF726P1Q15940 193 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 CST9LP1Q5W188 147 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 RPL7L1Q6DKI1 246 aaKnown RBP8.02□□□□□ -1.13
COPS7A-211ENST00000540408 STOML3Q8TAV4 291 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 MED28Q9H204 178 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 DPH3P1Q9H4G8 78 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 ALG5Q9Y673 324 aa8.02□□□□□ -1.13
COPS7A-211ENST00000540408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.02□□□□□ -1.13
COPS7A-211ENST00000540408 TRBV25-1A0A075B6N4 114 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 LTAP01374 205 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 SMIM17P0DL12 118 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 AKR1C3P42330 323 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 SPANXN1Q5VSR9 72 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 PRR27Q6MZM9 219 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 CLPSL2Q6UWE3 100 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 SDIM1Q6ZPB5 146 aa8.01□□□□□ -1.13
COPS7A-211ENST00000540408 LINC00269Q8N2A0 174 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms