RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 ACTR3CQ9C0K3 210 aaPredicted RBP9.27□□□□□ -0.93
SEMA4D-222ENST00000540183 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
SEMA4D-222ENST00000540183 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 A0A1W2PRE2 83 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 PEX7O00628 323 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 SH2D1AO60880 128 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 IFNA7P01567 189 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 IGLV2-8P01709 118 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 OR11H4Q8NGC9 324 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 AQP10Q96PS8 301 aa9.26□□□□□ -0.93
SEMA4D-222ENST00000540183 M0R381 172 aa9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 RHODO00212 210 aa9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 MBP02144 154 aa9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 HNRNPA3P51991 378 aaKnown RBP9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 SERF2P84101 59 aa9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 SFRP2Q96HF1 295 aa9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 TNFSF18Q9UNG2 199 aa9.25□□□□□ -0.93
SEMA4D-222ENST00000540183 A0A087WX48 190 aa9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 DEFA1P59665 94 aa9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 DEFA3P59666 94 aa9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 DNLZQ5SXM8 178 aa9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 SERTAD4-AS1Q5TG53 156 aa9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 RPL7L1Q6DKI1 246 aaKnown RBP9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 SYT8Q8NBV8 401 aa9.24□□□□□ -0.93
SEMA4D-222ENST00000540183 FAM74A7A6NL05 159 aa9.23□□□□□ -0.93
SEMA4D-222ENST00000540183 UBE2D3P61077 147 aa9.23□□□□□ -0.93
SEMA4D-222ENST00000540183 UBE2D2P62837 147 aa9.23□□□□□ -0.93
SEMA4D-222ENST00000540183 ATRAIDQ6UW56 229 aa9.23□□□□□ -0.93
SEMA4D-222ENST00000540183 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
SEMA4D-222ENST00000540183 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
SEMA4D-222ENST00000540183 A6NHS1 94 aa9.22□□□□□ -0.93
SEMA4D-222ENST00000540183 OXTP01178 125 aa9.22□□□□□ -0.93
SEMA4D-222ENST00000540183 C15orf54Q8N8G6 183 aa9.22□□□□□ -0.93
SEMA4D-222ENST00000540183 CTXND1A0A1B0GTU2 59 aa9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 TMEM262E9PQX1 116 aa9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 TPT1P13693 172 aaKnown RBP9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 FAM162BQ5T6X4 162 aa9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 DAZAP1Q96EP5 407 aaKnown RBP9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 PLA2G2DQ9UNK4 145 aa9.21□□□□□ -0.94
SEMA4D-222ENST00000540183 USP17L23D6RBM5 183 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 SEC11BP0C7V7 166 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 RPL36AP83881 106 aaKnown RBP9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 ELOBQ15370 118 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 ZNF674Q2M3X9 581 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 COX8CQ7Z4L0 72 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 RPL36ALQ969Q0 106 aaKnown RBP9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 C1orf43Q9BWL3 253 aa9.2□□□□□ -0.94
SEMA4D-222ENST00000540183 TRBV7-3A0A075B6L6 115 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 PANO1I0J062 215 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 HLA-DQA1P01909 254 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 RPL19P84098 196 aaKnown RBP9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 Q0VG73 95 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 KCNIP4Q6PIL6 250 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 ZFP82Q8N141 532 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 NEXN-AS1Q8NBZ9 246 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 MED28Q9H204 178 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 ZFP30Q9Y2G7 519 aa9.19□□□□□ -0.94
SEMA4D-222ENST00000540183 TRBV6-8A0A0A6YYG3 113 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 MUC21A0A0G2JKD1 596 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 MUC21A0A140T8X8 626 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 ANGP03950 147 aaKnown RBP9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 PRSS1P07477 247 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 UBE2G1P62253 170 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 OR10AG1Q8NH19 301 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 FMC1Q96HJ9 113 aa9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
SEMA4D-222ENST00000540183 FXYD6-FXYD2A0A087WZ82 144 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 BORCS7-ASMTA0A0B4J1R7 106 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 PTTG1O95997 202 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 LTAP01374 205 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 CRPP02741 224 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 ZNF56Q15929 161 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 C14orf177Q52M58 125 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 OR10G8Q8NGN5 311 aa9.17□□□□□ -0.94
SEMA4D-222ENST00000540183 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
SEMA4D-222ENST00000540183 AKR1C8PQ5T2L2 129 aa9.16□□□□□ -0.94
SEMA4D-222ENST00000540183 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
SEMA4D-222ENST00000540183 INO80EQ8NBZ0 244 aaPredicted RBP9.16□□□□□ -0.94
SEMA4D-222ENST00000540183 CHCHD5Q9BSY4 110 aa9.16□□□□□ -0.94
SEMA4D-222ENST00000540183 MAP1LC3BQ9GZQ8 125 aa9.16□□□□□ -0.94
SEMA4D-222ENST00000540183 TRBV6-1A0A0K0K1D8 114 aa9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 GIPP09681 153 aaPredicted RBP9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 RAB4BP61018 213 aa9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 SSTP61278 116 aa9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 CST9LP1Q5W188 147 aa9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 PRR27Q6MZM9 219 aa9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 KRTAP26-1Q6PEX3 210 aa9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 NKX6-2Q9C056 277 aaPredicted RBP9.15□□□□□ -0.94
SEMA4D-222ENST00000540183 TNXBP22105 4242 aa9.14□□□□□ -0.95
SEMA4D-222ENST00000540183 AKR1C3P42330 323 aa9.14□□□□□ -0.95
SEMA4D-222ENST00000540183 FHITP49789 147 aa9.14□□□□□ -0.95
SEMA4D-222ENST00000540183 GAGE6Q13070 117 aa9.14□□□□□ -0.95
SEMA4D-222ENST00000540183 CYTL1Q9NRR1 136 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms