RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 PHLDA3Q9Y5J5 127 aa4.87□□□□□ -1.63
LPCAT3-209ENST00000540060 TRGV4A0A0C4DH28 118 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 A0A0J9YY99 117 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 A8MWV9 139 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 FAM229AH3BQW9 127 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 M0R381 172 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 GZMBP10144 247 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 CRYBA4P53673 196 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 RPS20P60866 119 aaKnown RBP4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 UFSP1Q6NVU6 142 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 ZFP82Q8N141 532 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 SYT8Q8NBV8 401 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 RPP21Q9H633 154 aaKnown RBP4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 JPT2Q9H910 190 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 PRO0255Q9UI72 69 aa4.86□□□□□ -1.63
LPCAT3-209ENST00000540060 A0A096LPF7 62 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 IGHV3-73A0A0B4J1V6 119 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 XKRY2A2RUG3 117 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 CIDEAO60543 219 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 LY6G6CO95867 125 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 NUDT3O95989 172 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 P0DMU3 169 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 FAM231AP0DMU4 169 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 FAM231CP0DMU5 169 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 GATA1P15976 413 aaPredicted RBP4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 CTRLP40313 264 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 RPL23P62829 140 aaKnown RBP4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 SLAQ13239 276 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 TMEM241Q24JQ0 296 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 CT83Q5H943 113 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 ZFP2Q6ZN57 461 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 FER1L6-AS1Q8NA97 138 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 ISOC2Q96AB3 205 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 SFRP2Q96HF1 295 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 NAT8Q9UHE5 227 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 HHLA3Q9XRX5 114 aa4.85□□□□□ -1.63
LPCAT3-209ENST00000540060 MUC21A0A0G2JKD1 596 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 MUC21A0A140T8X8 626 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 A0A1W2PPQ1 181 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 RHODO00212 210 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 GATCO43716 136 aaKnown RBP4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 CRYGDP07320 174 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 ERVFC1-1P60608 527 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 ADIRFQ15847 76 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 SOHLH1Q5JUK2 328 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 SPANXN1Q5VSR9 72 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 GTSF1Q8WW33 167 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 TPPP3Q9BW30 176 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 CNFNQ9BYD5 112 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 SAMD10Q9BYL1 202 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 MRPL18Q9H0U6 180 aaKnown RBP4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 OSTCQ9NRP0 149 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 ICOSQ9Y6W8 199 aa4.84□□□□□ -1.63
LPCAT3-209ENST00000540060 A0A087WWL8 130 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 LOC100131303A0A0U1RQF7 123 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 TRBV6-4A0A1B0GX49 114 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 F2Z2F3 143 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 K7EQD1 137 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 GYPEP15421 78 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 CACNG7P62955 275 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 RHOHQ15669 191 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 RNF212Q495C1 297 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 FAM74A4Q5TZK3 123 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 LYZL1Q6UWQ5 148 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 Q6ZSN1 163 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 C15orf54Q8N8G6 183 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 AP1S3Q96PC3 154 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 V9GYV3 84 aa4.83□□□□□ -1.64
LPCAT3-209ENST00000540060 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 LINC00862A6NCI5 91 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 A8MWL6 223 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 LINC00694P0DN24 101 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 ADCYAP1P18509 176 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 SRIP30626 198 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 MRPL23Q16540 153 aaKnown RBP4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 ESRGQ1W209 222 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 COMMD7Q86VX2 200 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 UBE2DNLQ8IWF7 75 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 TSKUQ8WUA8 353 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 GFRA4Q9GZZ7 299 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 MSRB1Q9NZV6 116 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 LINC00588Q9Y4M8 146 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
LPCAT3-209ENST00000540060 FAM231BA6NCW3 169 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 HIGD1CA8MV81 97 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 TRGC1P0CF51 173 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 NTF3P20783 257 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 CCL18P55774 89 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 FAM3BP58499 235 aaPredicted RBP4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 LINC00315P59091 139 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 SSTP61278 116 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 PNRC1Q12796 327 aaPredicted RBP4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 ZNF56Q15929 161 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 ANKRD39Q53RE8 183 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 NEGR1Q7Z3B1 354 aa4.81□□□□□ -1.64
LPCAT3-209ENST00000540060 C14orf178Q8N769 122 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms