RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 IGHV4-30-2A0A087WSY4 118 aa7.73□□□□□ -1.17
TRAF1-202ENST00000540010 IGHV3-38A0A0C4DH36 116 aa7.73□□□□□ -1.17
TRAF1-202ENST00000540010 PF4P02776 101 aa7.73□□□□□ -1.17
TRAF1-202ENST00000540010 CTSGP08311 255 aa7.73□□□□□ -1.17
TRAF1-202ENST00000540010 C10orf105Q8TEF2 133 aa7.73□□□□□ -1.17
TRAF1-202ENST00000540010 FGF6P10767 208 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 PRIMA1Q86XR5 153 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 RPL39LQ96EH5 51 aaKnown RBP7.72□□□□□ -1.17
TRAF1-202ENST00000540010 IGSF10Q6WRI0 2623 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 A0A087WX48 190 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 FAM223BA6NKX1 122 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 FAM223AQ8IWN6 122 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 WFDC2Q14508 124 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 BBC3Q96PG8 261 aaPredicted RBP7.72□□□□□ -1.17
TRAF1-202ENST00000540010 TACC2O95359 2948 aa7.72□□□□□ -1.17
TRAF1-202ENST00000540010 B4DSR2 109 aa7.71□□□□□ -1.17
TRAF1-202ENST00000540010 PAX4O43316 350 aa7.71□□□□□ -1.17
TRAF1-202ENST00000540010 CRYGCP07315 174 aa7.71□□□□□ -1.17
TRAF1-202ENST00000540010 MORN3Q6PF18 240 aaPredicted RBP7.71□□□□□ -1.17
TRAF1-202ENST00000540010 CENPVL3A0A0U1RRI6 287 aa7.71□□□□□ -1.17
TRAF1-202ENST00000540010 GATD1Q8NB37 220 aa7.71□□□□□ -1.17
TRAF1-202ENST00000540010 XCL2Q9UBD3 114 aa7.71□□□□□ -1.17
TRAF1-202ENST00000540010 FN1P02751 2386 aaKnown RBP7.71□□□□□ -1.18
TRAF1-202ENST00000540010 SIVA1O15304 175 aa7.71□□□□□ -1.18
TRAF1-202ENST00000540010 ZNF843Q8N446 348 aa7.71□□□□□ -1.18
TRAF1-202ENST00000540010 EPG5Q9HCE0 2579 aa7.71□□□□□ -1.18
TRAF1-202ENST00000540010 RPL36AP83881 106 aaKnown RBP7.71□□□□□ -1.18
TRAF1-202ENST00000540010 RPL36ALQ969Q0 106 aaKnown RBP7.71□□□□□ -1.18
TRAF1-202ENST00000540010 PRO1854Q9UHT4 67 aa7.71□□□□□ -1.18
TRAF1-202ENST00000540010 IGHV1-69DA0A0B4J2H0 117 aa7.7□□□□□ -1.18
TRAF1-202ENST00000540010 IGHV1-69P01742 117 aa7.7□□□□□ -1.18
TRAF1-202ENST00000540010 HRNRQ86YZ3 2850 aaPredicted RBP7.7□□□□□ -1.18
TRAF1-202ENST00000540010 IGHV7-81A0A0B4J1V7 117 aa7.7□□□□□ -1.18
TRAF1-202ENST00000540010 C19orf71A6NCJ1 209 aa7.7□□□□□ -1.18
TRAF1-202ENST00000540010 J3QQQ9 107 aa7.7□□□□□ -1.18
TRAF1-202ENST00000540010 MSMBP08118 114 aa7.7□□□□□ -1.18
TRAF1-202ENST00000540010 TRPT1Q86TN4 253 aaKnown RBP7.7□□□□□ -1.18
TRAF1-202ENST00000540010 IGLV11-55A0A075B6I3 123 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 Q8N9W7 124 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 PPDPFLQ8WWR9 84 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 BUB3O43684 328 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 DSCR9P59020 149 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 ZNF415Q09FC8 603 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 SPATA12Q7Z6I5 190 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 CFAP46Q8IYW2 2715 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 RBMY1BA6NDE4 496 aaKnown RBP7.69□□□□□ -1.18
TRAF1-202ENST00000540010 RBMY1EA6NEQ0 496 aaKnown RBP7.69□□□□□ -1.18
TRAF1-202ENST00000540010 VWC2LB2RUY7 222 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 IGLL5B9A064 214 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 RBMY1DP0C7P1 496 aaKnown RBP7.69□□□□□ -1.18
TRAF1-202ENST00000540010 RBMY1A1P0DJD3 496 aaKnown RBP7.69□□□□□ -1.18
TRAF1-202ENST00000540010 RBMY1CP0DJD4 496 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 RPL35AP18077 110 aaKnown RBP7.69□□□□□ -1.18
TRAF1-202ENST00000540010 TRBV20-1A0A075B6N2 111 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 A0A1B0GXF2 115 aa7.69□□□□□ -1.18
TRAF1-202ENST00000540010 COL12A1Q99715 3063 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 NDUFA12Q9UI09 145 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 USP24Q9UPU5 2620 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 IGHV1OR15-1A0A075B7D0 117 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 CFAP161Q6P656 301 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 BOD1L2Q8IYS8 172 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 NDUFA4O00483 81 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 CFHR3Q02985 330 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 EBI3Q14213 229 aa7.68□□□□□ -1.18
TRAF1-202ENST00000540010 SLC25A20O43772 301 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 Q8N6K4 173 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 I3L3M4 83 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 MALP21145 153 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 ZNF80P51504 273 aaPredicted RBP7.67□□□□□ -1.18
TRAF1-202ENST00000540010 BLCAPP62952 87 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 NTN5Q8WTR8 489 aaPredicted RBP7.67□□□□□ -1.18
TRAF1-202ENST00000540010 MLST8Q9BVC4 326 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 DCHS2Q6V1P9 2916 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 CRPP02741 224 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 C6orf226Q5I0X4 101 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 MBD6Q96DN6 1003 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 FANCD2OSQ96PS1 177 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 C20orf78Q9BR46 151 aa7.67□□□□□ -1.18
TRAF1-202ENST00000540010 HIST1H4AP62805 103 aaKnown RBP7.66□□□□□ -1.18
TRAF1-202ENST00000540010 TCTEX1D4Q5JR98 221 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 RNF223E7ERA6 249 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 CTRLP40313 264 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 RPL39P62891 51 aaKnown RBP7.66□□□□□ -1.18
TRAF1-202ENST00000540010 TAL2Q16559 108 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 FOXI2Q6ZQN5 318 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 TMEM141Q96I45 108 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 ATP6V0BQ99437 205 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 FLNCQ14315 2725 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 GAGE12JA6NER3 117 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 DEFB130BP0DP73 79 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 DEFB130AP0DP74 79 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 GAGE4Q13068 117 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 GAGE5Q13069 117 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 NSUN5P1Q3KNT7 163 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 ZNRF2Q8NHG8 242 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 RASL10AQ92737 203 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 ODF1Q14990 250 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 GAGE2AQ6NT46 116 aa7.66□□□□□ -1.18
TRAF1-202ENST00000540010 POLQO75417 2590 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms