RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 SFTA3P0C7M3 94 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 SSTP61278 116 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 CACNG7P62955 275 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 DNLZQ5SXM8 178 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 UBE2DNLQ8IWF7 75 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.58□□□□□ -1.68
SNHG1-212ENST00000539975 FER1L6-AS1Q8NA97 138 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 PTH2Q96A98 100 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 PRADC1Q9BSG0 188 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 RNASE7Q9H1E1 156 aaKnown RBP4.58□□□□□ -1.68
SNHG1-212ENST00000539975 C11orf21Q9P2W6 132 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 PRO0255Q9UI72 69 aa4.58□□□□□ -1.68
SNHG1-212ENST00000539975 TRBV20OR9-2A0A075B6H5 130 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 TRAV26-1A0A087WT03 109 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 C19orf71A6NCJ1 209 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 F8W036 122 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 H3BNG1 76 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 PPP1R2P9O14990 202 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 IGLV2-8P01709 118 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 OR5AL1P0C617 328 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 TRGC1P0CF51 173 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 P0DMU3 169 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 FAM231AP0DMU4 169 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 FAM231CP0DMU5 169 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 RNASE3P12724 160 aaKnown RBP4.57□□□□□ -1.68
SNHG1-212ENST00000539975 CCL18P55774 89 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 RPL19P84098 196 aaKnown RBP4.57□□□□□ -1.68
SNHG1-212ENST00000539975 IFITM2Q01629 132 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 PNRC1Q12796 327 aaPredicted RBP4.57□□□□□ -1.68
SNHG1-212ENST00000539975 TWIST1Q15672 202 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 FAM74A4Q5TZK3 123 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 TMEM88Q6PEY1 159 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 FAM231DQ6ZW35 169 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 LINC01551Q86U37 167 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 LINC00612Q8N6U2 182 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 C9orf85Q96MD7 179 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 OSTCQ9NRP0 149 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 AGRNO00468 2067 aa4.57□□□□□ -1.68
SNHG1-212ENST00000539975 A0A0J9YY99 117 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 F5H697 171 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 K7EN84 100 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 LY6G6CO95867 125 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 MT-ND4LP03901 98 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 GCSHP23434 173 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 MRPL23Q16540 153 aaKnown RBP4.56□□□□□ -1.68
SNHG1-212ENST00000539975 ZFP2Q6ZN57 461 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 SH2D6Q7Z4S9 175 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 COMMD7Q86VX2 200 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 OR10G8Q8NGN5 311 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 SFRP2Q96HF1 295 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 ZNF479Q96JC4 524 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 AP1S3Q96PC3 154 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 ICOSQ9Y6W8 199 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 NBEAL2Q6ZNJ1 2754 aa4.56□□□□□ -1.68
SNHG1-212ENST00000539975 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 TRBV6-4A0A1B0GX49 114 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 FAM231BA6NCW3 169 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 C9JQL5 133 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 H7C1H1 209 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 RS1O15537 224 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 GZMBP10144 247 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 SRIP30626 198 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 PTTG1IPP53801 180 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 RPL23P62829 140 aaKnown RBP4.55□□□□□ -1.68
SNHG1-212ENST00000539975 RHOHQ15669 191 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 ZNF56Q15929 161 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 CFAP126Q5VTH2 177 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 WDR73Q6P4I2 378 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 LYZL1Q6UWQ5 148 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 TSKUQ8WUA8 353 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 ISOC2Q96AB3 205 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 GFRA4Q9GZZ7 299 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 SCRT2Q9NQ03 307 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 NAT8BQ9UHF3 227 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 CMYA5Q8N3K9 4069 aa4.55□□□□□ -1.68
SNHG1-212ENST00000539975 A0A087WWL8 130 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 MUC21A0A0G2JKD1 596 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 MUC21A0A140T8X8 626 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 TMEM218A2RU14 115 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 SNAI2O43623 268 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 S100A8P05109 93 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 NTF3P20783 257 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 CRYBA4P53673 196 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 RAB4BP61018 213 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 S100A12P80511 92 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 RIGQ13278 110 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 RNF212Q495C1 297 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 LGALS9CQ6DKI2 356 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 NEGR1Q7Z3B1 354 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 C14orf178Q8N769 122 aaPredicted RBP4.54□□□□□ -1.68
SNHG1-212ENST00000539975 LINC00469Q8N7U9 141 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 OR10AG1Q8NH19 301 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 PGLYRP4Q96LB8 373 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 APLNQ9ULZ1 77 aa4.54□□□□□ -1.68
SNHG1-212ENST00000539975 TGP01266 2768 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 A0A1B0GUT8 65 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 LINC00862A6NCI5 91 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 HIGD1CA8MV81 97 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 MGPP08493 103 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms