RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 PRR9Q5T870 116 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 BAGE3Q86Y29 109 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 KCNS1Q96KK3 526 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 LINC01587Q99440 93 aa11.22□□□□□ -0.61
DDB1-216ENST00000539739 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 Q6AWC8 147 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 FA2HQ7L5A8 372 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 OVOL2Q9BRP0 275 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 TNFRSF18Q9Y5U5 241 aa11.21□□□□□ -0.61
DDB1-216ENST00000539739 A6NDN8 102 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 K7EP34 96 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 ZNF324O75467 553 aaPredicted RBP11.2□□□□□ -0.62
DDB1-216ENST00000539739 LINC00310P59036 64 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 COX8CQ7Z4L0 72 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 NHLRC2Q8NBF2 726 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 GEMIN7Q9H840 131 aaKnown RBP11.2□□□□□ -0.62
DDB1-216ENST00000539739 RETNQ9HD89 108 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 C9JCJ5 164 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 BORCS7Q96B45 105 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 MLST8Q9BVC4 326 aa11.2□□□□□ -0.62
DDB1-216ENST00000539739 FABP5P3A8MUU1 101 aa11.19□□□□□ -0.62
DDB1-216ENST00000539739 RBMY1A1P0DJD3 496 aaKnown RBP11.19□□□□□ -0.62
DDB1-216ENST00000539739 RBMY1CP0DJD4 496 aa11.19□□□□□ -0.62
DDB1-216ENST00000539739 MGST1P10620 155 aaKnown RBP11.19□□□□□ -0.62
DDB1-216ENST00000539739 RBMY1FQ15415 496 aaKnown RBP11.19□□□□□ -0.62
DDB1-216ENST00000539739 Q6ZVH6 145 aa11.19□□□□□ -0.62
DDB1-216ENST00000539739 AP1S3Q96PC3 154 aa11.19□□□□□ -0.62
DDB1-216ENST00000539739 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
DDB1-216ENST00000539739 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
DDB1-216ENST00000539739 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
DDB1-216ENST00000539739 HTN1P15515 57 aa11.18□□□□□ -0.62
DDB1-216ENST00000539739 ZNF80P51504 273 aaPredicted RBP11.18□□□□□ -0.62
DDB1-216ENST00000539739 FAM162BQ5T6X4 162 aa11.18□□□□□ -0.62
DDB1-216ENST00000539739 NBEAL2Q6ZNJ1 2754 aa11.18□□□□□ -0.62
DDB1-216ENST00000539739 NUDT3O95989 172 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 MIFP14174 115 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 FAM159AQ6UWV7 190 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 LY96Q9Y6Y9 160 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 IGHV1OR15-1A0A075B7D0 117 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 H3BRM9 83 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 IGLV2-8P01709 118 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 Q6ZQT7 251 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 GNB1LQ9BYB4 327 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 X6R8D5 127 aa11.17□□□□□ -0.62
DDB1-216ENST00000539739 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
DDB1-216ENST00000539739 C3orf79P0CE67 100 aa11.16□□□□□ -0.62
DDB1-216ENST00000539739 AMTP48728 403 aa11.16□□□□□ -0.62
DDB1-216ENST00000539739 SMAGPQ0VAQ4 97 aa11.16□□□□□ -0.62
DDB1-216ENST00000539739 OCC1Q8TAD7 63 aa11.16□□□□□ -0.62
DDB1-216ENST00000539739 DAZAP1Q96EP5 407 aaKnown RBP11.16□□□□□ -0.62
DDB1-216ENST00000539739 LINC00467Q9BRT7 94 aa11.16□□□□□ -0.62
DDB1-216ENST00000539739 PRKDCP78527 4128 aaKnown RBP11.15□□□□□ -0.62
DDB1-216ENST00000539739 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
DDB1-216ENST00000539739 SH2D1AO60880 128 aa11.15□□□□□ -0.62
DDB1-216ENST00000539739 CRIP1P50238 77 aa11.15□□□□□ -0.62
DDB1-216ENST00000539739 MUC21Q5SSG8 566 aa11.15□□□□□ -0.62
DDB1-216ENST00000539739 SLC25A34Q6PIV7 304 aa11.15□□□□□ -0.62
DDB1-216ENST00000539739 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
DDB1-216ENST00000539739 ORM1P02763 201 aa11.14□□□□□ -0.63
DDB1-216ENST00000539739 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
DDB1-216ENST00000539739 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
DDB1-216ENST00000539739 TRAV8-6A0A0B4J262 113 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 ANXA2RQ3ZCQ2 193 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 C16orf74Q96GX8 76 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 GTSF1LQ9H1H1 148 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 TRGV11A0A075B6L2 103 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 IGHV4-28A0A0C4DH34 117 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 PRM2P04554 102 aa11.13□□□□□ -0.63
DDB1-216ENST00000539739 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
DDB1-216ENST00000539739 K7EN84 100 aa11.12□□□□□ -0.63
DDB1-216ENST00000539739 GAGE5Q13069 117 aa11.12□□□□□ -0.63
DDB1-216ENST00000539739 GAGE6Q13070 117 aa11.12□□□□□ -0.63
DDB1-216ENST00000539739 Q8NAQ8 132 aa11.12□□□□□ -0.63
DDB1-216ENST00000539739 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
DDB1-216ENST00000539739 P01737 135 aa11.11□□□□□ -0.63
DDB1-216ENST00000539739 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
DDB1-216ENST00000539739 U3KQK5 164 aa11.11□□□□□ -0.63
DDB1-216ENST00000539739 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
DDB1-216ENST00000539739 C19orf71A6NCJ1 209 aa11.1□□□□□ -0.63
DDB1-216ENST00000539739 HERV-K104P63124 156 aa11.1□□□□□ -0.63
DDB1-216ENST00000539739 IBA57Q5T440 356 aaKnown RBP11.1□□□□□ -0.63
DDB1-216ENST00000539739 C11orf68Q9H3H3 251 aaKnown RBP11.1□□□□□ -0.63
DDB1-216ENST00000539739 IL36BQ9NZH7 164 aa11.1□□□□□ -0.63
DDB1-216ENST00000539739 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 MUC21A0A0G2JKD1 596 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 MUC21A0A140T8X8 626 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 SNURFLB1AK76 121 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 GNRH2O43555 120 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 EMP1P54849 157 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 ZNF415Q09FC8 603 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 C18orf32Q8TCD1 76 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 DNAH9Q9NYC9 4486 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 TMSB15BA0A087X1C1 80 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms